RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NOVA2Q9UNW9 492 aaKnown RBP5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 HIF3AQ9Y2N7 669 aa5.44□□□□□ -1.54
HMGB1P12-201ENST00000438594 ARL4DP49703 201 aa5.43□□□□□ -1.54
HMGB1P12-201ENST00000438594 PIP4K2BP78356 416 aa5.43□□□□□ -1.54
HMGB1P12-201ENST00000438594 NFKBIBQ15653 356 aa5.43□□□□□ -1.54
HMGB1P12-201ENST00000438594 SGO2Q562F6 1265 aa5.43□□□□□ -1.54
HMGB1P12-201ENST00000438594 FNBP4Q8N3X1 1017 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P12-201ENST00000438594 C12orf50Q8NA57 414 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P12-201ENST00000438594 TM4SF5O14894 197 aa5.42□□□□□ -1.54
HMGB1P12-201ENST00000438594 KIF4AO95239 1232 aa5.42□□□□□ -1.54
HMGB1P12-201ENST00000438594 ASIC4Q96FT7 647 aa5.42□□□□□ -1.54
HMGB1P12-201ENST00000438594 POLR3GLQ9BT43 218 aa5.42□□□□□ -1.54
HMGB1P12-201ENST00000438594 F13BP05160 661 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 ACPPP15309 386 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 JAG1P78504 1218 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 NUTM2GQ5VZR2 741 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 ZNF438Q7Z4V0 828 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 CEP120Q8N960 986 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 USP26Q9BXU7 913 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 ADAM19Q9H013 955 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 OSGEPQ9NPF4 335 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 CCDC39Q9UFE4 941 aa5.41□□□□□ -1.54
HMGB1P12-201ENST00000438594 ARID1BQ8NFD5 2236 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 TNFRSF10BO14763 440 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 TRPA1O75762 1119 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 C8AP07357 584 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 FOSL1P15407 271 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 USP11P51784 963 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 C19orf57Q0VDD7 668 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 PAOXQ6QHF9 649 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 CAPN12Q6ZSI9 719 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 VSIG10LQ86VR7 867 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 RETREG2Q8NC44 543 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 WNT8BQ93098 351 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 FBXL18Q96ME1 805 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 ELP3Q9H9T3 547 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 TMEM63CQ9P1W3 806 aa5.4□□□□□ -1.54
HMGB1P12-201ENST00000438594 FAM95CA0A1B0GW59 222 aa5.39□□□□□ -1.55
HMGB1P12-201ENST00000438594 CYP26A1O43174 497 aa5.39□□□□□ -1.55
HMGB1P12-201ENST00000438594 SWI5Q1ZZU3 235 aa5.39□□□□□ -1.55
HMGB1P12-201ENST00000438594 CFAP70Q5T0N1 1121 aa5.39□□□□□ -1.55
HMGB1P12-201ENST00000438594 HGSNATQ68CP4 663 aa5.39□□□□□ -1.55
HMGB1P12-201ENST00000438594 FLCNQ8NFG4 579 aa5.39□□□□□ -1.55
HMGB1P12-201ENST00000438594 ACIN1Q9UKV3 1341 aaKnown RBP5.39□□□□□ -1.55
HMGB1P12-201ENST00000438594 PDE2AO00408 941 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 ZBTB39O15060 712 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 CES1P23141 567 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 MSMPQ1L6U9 139 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 FAM9AQ8IZU1 332 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 SHISA5Q8N114 240 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 ABTB2Q8N961 1025 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 TTC16Q8NEE8 873 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 FBLIM1Q8WUP2 373 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 NUDT16Q96DE0 195 aaKnown RBP5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 TBC1D32Q96NH3 1257 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 HHIPQ96QV1 700 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 CYP4F12Q9HCS2 524 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 CNTN3Q9P232 1028 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 STIM2Q9P246 746 aa5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P12-201ENST00000438594 IKBKEQ14164 716 aa5.37□□□□□ -1.55
HMGB1P12-201ENST00000438594 OCLNQ16625 522 aa5.37□□□□□ -1.55
HMGB1P12-201ENST00000438594 PDE12Q6L8Q7 609 aaKnown RBP5.37□□□□□ -1.55
HMGB1P12-201ENST00000438594 C1orf127Q8N9H9 656 aa5.37□□□□□ -1.55
HMGB1P12-201ENST00000438594 METTL22Q9BUU2 404 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P12-201ENST00000438594 LRRC4CQ9HCJ2 640 aa5.37□□□□□ -1.55
HMGB1P12-201ENST00000438594 MEGF11A6BM72 1044 aa5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 DRD2P14416 443 aa5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 C8orf34Q49A92 452 aa5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 ATCAYQ86WG3 371 aa5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 DZANK1Q9NVP4 752 aa5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 BSDC1Q9NW68 430 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 CXXC1Q9P0U4 656 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 SALL4Q9UJQ4 1053 aa5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 SERPINA10Q9UK55 444 aa5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 ZNF777Q9ULD5 760 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P12-201ENST00000438594 JUNBP17275 347 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 ADMP35318 185 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 PDE4CQ08493 712 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 CPSF6Q16630 551 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 CDPF1Q6NVV7 123 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 CBLL1Q75N03 491 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 POU5F2Q8N7G0 328 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 AGBL5Q8NDL9 886 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 ASAP3Q8TDY4 903 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 STK32AQ8WU08 396 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 EDEM1Q92611 657 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 CCDC97Q96F63 343 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 YIPF2Q9BWQ6 316 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 ZMIZ1Q9ULJ6 1067 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 SOX13Q9UN79 622 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 AMOTL2Q9Y2J4 779 aa5.35□□□□□ -1.55
HMGB1P12-201ENST00000438594 A6NHS1 94 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 FAM170BA6NMN3 283 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 NFKBIEO00221 500 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 SOX1O00570 391 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 PRNPP04156 253 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 PCSK2P16519 638 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 DNM1Q05193 864 aaKnown RBP5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 TAF7LQ5H9L4 462 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms