RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MAP3K2Q9Y2U5 619 aa9.95□□□□□ -0.82
VPS50-204ENST00000438395 DUOX1Q9NRD9 1551 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 XDHP47989 1333 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 DPYSL4O14531 572 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 CTSWP56202 376 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 HUNKP57058 714 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 NOGQ13253 232 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 KIF4BQ2VIQ3 1234 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 SAMD7Q7Z3H4 446 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 USP48Q86UV5 1035 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 C2orf69Q8N8R5 385 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 HHIPL1Q96JK4 782 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 SEC31BQ9NQW1 1179 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 PGAP2Q9UHJ9 254 aa9.94□□□□□ -0.82
VPS50-204ENST00000438395 LRRC37AA6NMS7 1700 aa9.93□□□□□ -0.82
VPS50-204ENST00000438395 SHTN1A0MZ66 631 aa9.93□□□□□ -0.82
VPS50-204ENST00000438395 AOC2O75106 756 aa9.93□□□□□ -0.82
VPS50-204ENST00000438395 HIRAP54198 1017 aaPredicted RBP9.93□□□□□ -0.82
VPS50-204ENST00000438395 KSR2Q6VAB6 950 aa9.93□□□□□ -0.82
VPS50-204ENST00000438395 TSR2Q969E8 191 aaKnown RBP9.93□□□□□ -0.82
VPS50-204ENST00000438395 GGA3Q9NZ52 723 aa9.93□□□□□ -0.82
VPS50-204ENST00000438395 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
VPS50-204ENST00000438395 LAMB2P55268 1798 aa9.93□□□□□ -0.82
VPS50-204ENST00000438395 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
VPS50-204ENST00000438395 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
VPS50-204ENST00000438395 BRPF1P55201 1214 aaPredicted RBP9.92□□□□□ -0.82
VPS50-204ENST00000438395 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
VPS50-204ENST00000438395 TWISTNBQ3B726 338 aaPredicted RBP9.92□□□□□ -0.82
VPS50-204ENST00000438395 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
VPS50-204ENST00000438395 JARID2Q92833 1246 aaPredicted RBP9.92□□□□□ -0.82
VPS50-204ENST00000438395 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
VPS50-204ENST00000438395 ADAM33Q9BZ11 813 aa9.92□□□□□ -0.82
VPS50-204ENST00000438395 GBA2Q9HCG7 927 aaPredicted RBP9.92□□□□□ -0.82
VPS50-204ENST00000438395 RTL9Q8NET4 1388 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 DDX60Q8IY21 1712 aaKnown RBP9.91□□□□□ -0.82
VPS50-204ENST00000438395 ADM5C9JUS6 153 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 IGHMBP2P38935 993 aaKnown RBP9.91□□□□□ -0.82
VPS50-204ENST00000438395 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
VPS50-204ENST00000438395 UBE3BQ7Z3V4 1068 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 OGFOD1Q8N543 542 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 ABHD8Q96I13 439 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 MYH16Q9H6N6 1097 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 MRS2Q9HD23 443 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
VPS50-204ENST00000438395 THSD7BQ9C0I4 1608 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 IL16Q14005 1332 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 USP17L3A6NCW0 530 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 USP17L4A6NCW7 530 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 VIL1P09327 827 aaKnown RBP9.9□□□□□ -0.82
VPS50-204ENST00000438395 USP17L8P0C7I0 530 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 KCNJ4P48050 445 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 ZNF157P51786 506 aaPredicted RBP9.9□□□□□ -0.82
VPS50-204ENST00000438395 FKBP5Q13451 457 aaPredicted RBP9.9□□□□□ -0.82
VPS50-204ENST00000438395 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 USP17L1Q7RTZ2 530 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 PODNQ7Z5L7 613 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 TSPYL6Q8N831 410 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 KCNQ5Q9NR82 932 aa9.9□□□□□ -0.82
VPS50-204ENST00000438395 CCDC85CA6NKD9 419 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 NEURL1BA8MQ27 555 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 ANP32CO43423 234 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 EGFRP00533 1210 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 IGKV5-2P06315 115 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 CWF19L2Q2TBE0 894 aaKnown RBP9.89□□□□□ -0.83
VPS50-204ENST00000438395 ANGEL2Q5VTE6 544 aaKnown RBP9.89□□□□□ -0.83
VPS50-204ENST00000438395 RGMBQ6NW40 437 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 MPHOSPH8Q99549 860 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 GREM2Q9H772 168 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 BSDC1Q9NW68 430 aaPredicted RBP9.89□□□□□ -0.83
VPS50-204ENST00000438395 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 TRPM7Q96QT4 1865 aa9.89□□□□□ -0.83
VPS50-204ENST00000438395 MED23Q9ULK4 1368 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 MYO3BQ8WXR4 1341 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 NF2P35240 595 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 ZNF280AP59817 542 aaPredicted RBP9.88□□□□□ -0.83
VPS50-204ENST00000438395 FLIIQ13045 1269 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 SCARF1Q14162 830 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 TTLL12Q14166 644 aaPredicted RBP9.88□□□□□ -0.83
VPS50-204ENST00000438395 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 CDCA5Q96FF9 252 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 ANKRD2Q9GZV1 360 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 MYOZ2Q9NPC6 264 aa9.88□□□□□ -0.83
VPS50-204ENST00000438395 FANCIQ9NVI1 1328 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 HRO43593 1189 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
VPS50-204ENST00000438395 CCT4P50991 539 aaKnown RBP9.87□□□□□ -0.83
VPS50-204ENST00000438395 FKBP1BP68106 108 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 GCKRQ14397 625 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 DLK2Q6UY11 383 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 DNAAF4Q8WXU2 420 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 COA1Q9GZY4 146 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 MINPP1Q9UNW1 487 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 LEMD3Q9Y2U8 911 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
VPS50-204ENST00000438395 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
VPS50-204ENST00000438395 ZNF609O15014 1411 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms