RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 FAM205AQ6ZU69 1335 aa20.24■□□□□ 0.83
CTSD-205ENST00000438213 A0A1B0GUL6 1792 aa20.23■□□□□ 0.83
CTSD-205ENST00000438213 HIRAP54198 1017 aaPredicted RBP20.23■□□□□ 0.83
CTSD-205ENST00000438213 MAP1SQ66K74 1059 aaPredicted RBP20.23■□□□□ 0.83
CTSD-205ENST00000438213 TRPM4Q8TD43 1214 aa20.23■□□□□ 0.83
CTSD-205ENST00000438213 PGAP2Q9UHJ9 254 aa20.23■□□□□ 0.83
CTSD-205ENST00000438213 TIMM10P62072 90 aa20.22■□□□□ 0.83
CTSD-205ENST00000438213 KIF4BQ2VIQ3 1234 aa20.22■□□□□ 0.83
CTSD-205ENST00000438213 HSP90AB4PQ58FF6 505 aa20.22■□□□□ 0.83
CTSD-205ENST00000438213 NEUROD6Q96NK8 337 aa20.22■□□□□ 0.83
CTSD-205ENST00000438213 MYOZ2Q9NPC6 264 aa20.22■□□□□ 0.83
CTSD-205ENST00000438213 A0A1B0GUL7 405 aa20.21■□□□□ 0.83
CTSD-205ENST00000438213 APLP1P51693 650 aa20.21■□□□□ 0.83
CTSD-205ENST00000438213 KIAA0825Q8IV33 1275 aa20.21■□□□□ 0.83
CTSD-205ENST00000438213 TBC1D22AQ8WUA7 517 aa20.21■□□□□ 0.83
CTSD-205ENST00000438213 IQSEC3Q9UPP2 1182 aaPredicted RBP20.21■□□□□ 0.83
CTSD-205ENST00000438213 ITGBL1O95965 494 aaPredicted RBP20.2■□□□□ 0.82
CTSD-205ENST00000438213 MFSD14BQ5SR56 506 aa20.2■□□□□ 0.82
CTSD-205ENST00000438213 GORABQ5T7V8 394 aa20.2■□□□□ 0.82
CTSD-205ENST00000438213 ERC1Q8IUD2 1116 aa20.2■□□□□ 0.82
CTSD-205ENST00000438213 GPR108Q9NPR9 543 aa20.2■□□□□ 0.82
CTSD-205ENST00000438213 JAG2Q9Y219 1238 aa20.2■□□□□ 0.82
CTSD-205ENST00000438213 PSME4Q14997 1843 aa20.2■□□□□ 0.82
CTSD-205ENST00000438213 CHAF1AQ13111 956 aaPredicted RBP20.19■□□□□ 0.82
CTSD-205ENST00000438213 CERS5Q8N5B7 392 aa20.19■□□□□ 0.82
CTSD-205ENST00000438213 DCPSQ96C86 337 aaKnown RBP20.19■□□□□ 0.82
CTSD-205ENST00000438213 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
CTSD-205ENST00000438213 SEMA3EO15041 775 aa20.18■□□□□ 0.82
CTSD-205ENST00000438213 EGFRP00533 1210 aa20.18■□□□□ 0.82
CTSD-205ENST00000438213 SCARF1Q14162 830 aa20.18■□□□□ 0.82
CTSD-205ENST00000438213 CCDC102BQ68D86 513 aa20.18■□□□□ 0.82
CTSD-205ENST00000438213 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
CTSD-205ENST00000438213 WDR66Q8TBY9 1149 aa20.18■□□□□ 0.82
CTSD-205ENST00000438213 F8W031 263 aaPredicted RBP20.17■□□□□ 0.82
CTSD-205ENST00000438213 ADORA1P30542 326 aa20.17■□□□□ 0.82
CTSD-205ENST00000438213 DENND2AQ9ULE3 1009 aa20.17■□□□□ 0.82
CTSD-205ENST00000438213 ZBTB22O15209 634 aa20.16■□□□□ 0.82
CTSD-205ENST00000438213 PHKA1P46020 1223 aa20.16■□□□□ 0.82
CTSD-205ENST00000438213 DLGAP5Q15398 846 aa20.16■□□□□ 0.82
CTSD-205ENST00000438213 SIRT2Q8IXJ6 389 aa20.16■□□□□ 0.82
CTSD-205ENST00000438213 EXOC6BQ9Y2D4 811 aa20.16■□□□□ 0.82
CTSD-205ENST00000438213 SUGT1Q9Y2Z0 365 aa20.16■□□□□ 0.82
CTSD-205ENST00000438213 PASKQ96RG2 1323 aa20.16■□□□□ 0.82
CTSD-205ENST00000438213 TNNI3KQ59H18 835 aa20.15■□□□□ 0.82
CTSD-205ENST00000438213 TTF2Q9UNY4 1162 aaKnown RBP20.15■□□□□ 0.82
CTSD-205ENST00000438213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.15■□□□□ 0.82
CTSD-205ENST00000438213 FPGT-TNNI3KV9GXZ4 949 aa20.15■□□□□ 0.82
CTSD-205ENST00000438213 ADAMTSL1Q8N6G6 1762 aa20.15■□□□□ 0.82
CTSD-205ENST00000438213 RAB11FIP3O75154 756 aa20.14■□□□□ 0.81
CTSD-205ENST00000438213 RBM5P52756 815 aaKnown RBP eCLIP20.14■□□□□ 0.81
CTSD-205ENST00000438213 KRT26Q7Z3Y9 468 aa20.14■□□□□ 0.81
CTSD-205ENST00000438213 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
CTSD-205ENST00000438213 SULF1Q8IWU6 871 aa20.14■□□□□ 0.81
CTSD-205ENST00000438213 MTMR14Q8NCE2 650 aa20.14■□□□□ 0.81
CTSD-205ENST00000438213 WNT10BO00744 389 aa20.13■□□□□ 0.81
CTSD-205ENST00000438213 NBPF9Q3BBW0 867 aa20.13■□□□□ 0.81
CTSD-205ENST00000438213 CCDC158Q5M9N0 1113 aa20.13■□□□□ 0.81
CTSD-205ENST00000438213 KIF1BPQ96EK5 621 aa20.13■□□□□ 0.81
CTSD-205ENST00000438213 MRIQ9BWK5 157 aa20.13■□□□□ 0.81
CTSD-205ENST00000438213 GLIS2Q9BZE0 524 aaPredicted RBP20.13■□□□□ 0.81
CTSD-205ENST00000438213 GGA3Q9NZ52 723 aa20.13■□□□□ 0.81
CTSD-205ENST00000438213 SERPINA10Q9UK55 444 aa20.13■□□□□ 0.81
CTSD-205ENST00000438213 PITPNM2Q9BZ72 1349 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 TMEM88BA6NKF7 163 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 MYO1BO43795 1136 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 UQCRFS1P1P0C7P4 283 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 HDLBPQ00341 1268 aaKnown RBP20.12■□□□□ 0.81
CTSD-205ENST00000438213 AAMPQ13685 434 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
CTSD-205ENST00000438213 ZGPATQ8N5A5 531 aaKnown RBP20.12■□□□□ 0.81
CTSD-205ENST00000438213 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 CREBZFQ9NS37 354 aa20.12■□□□□ 0.81
CTSD-205ENST00000438213 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
CTSD-205ENST00000438213 MAST3O60307 1309 aa20.11■□□□□ 0.81
CTSD-205ENST00000438213 ZBED3Q96IU2 234 aaPredicted RBP20.11■□□□□ 0.81
CTSD-205ENST00000438213 PDS5AQ29RF7 1337 aaKnown RBP20.1■□□□□ 0.81
CTSD-205ENST00000438213 TRAF5O00463 557 aa20.1■□□□□ 0.81
CTSD-205ENST00000438213 RASGRF1Q13972 1273 aa20.1■□□□□ 0.81
CTSD-205ENST00000438213 TTC39AQ5SRH9 613 aa20.1■□□□□ 0.81
CTSD-205ENST00000438213 SPTY2D1Q68D10 685 aaPredicted RBP20.1■□□□□ 0.81
CTSD-205ENST00000438213 CLASRPQ8N2M8 674 aaKnown RBP20.1■□□□□ 0.81
CTSD-205ENST00000438213 EAF2Q96CJ1 260 aaPredicted RBP20.1■□□□□ 0.81
CTSD-205ENST00000438213 ASTN2O75129 1339 aaPredicted RBP20.09■□□□□ 0.81
CTSD-205ENST00000438213 SALL1Q9NSC2 1324 aa20.09■□□□□ 0.81
CTSD-205ENST00000438213 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
CTSD-205ENST00000438213 APBB1O00213 710 aa20.09■□□□□ 0.81
CTSD-205ENST00000438213 LDHBP07195 334 aaKnown RBP20.09■□□□□ 0.81
CTSD-205ENST00000438213 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
CTSD-205ENST00000438213 ARID4AP29374 1257 aaPredicted RBP20.09■□□□□ 0.81
CTSD-205ENST00000438213 TEKT1Q969V4 418 aa20.09■□□□□ 0.81
CTSD-205ENST00000438213 DBNDD2Q9BQY9 259 aa20.09■□□□□ 0.81
CTSD-205ENST00000438213 CCDC8Q9H0W5 538 aaPredicted RBP20.09■□□□□ 0.81
CTSD-205ENST00000438213 ZNF646O15015 1829 aaPredicted RBP20.09■□□□□ 0.81
CTSD-205ENST00000438213 CRKP46108 304 aa20.08■□□□□ 0.81
CTSD-205ENST00000438213 GRIK5Q16478 980 aa20.08■□□□□ 0.81
CTSD-205ENST00000438213 AACSQ86V21 672 aa20.08■□□□□ 0.81
CTSD-205ENST00000438213 APOBEC3FQ8IUX4 373 aaKnown RBP20.08■□□□□ 0.81
CTSD-205ENST00000438213 SPATA5Q8NB90 893 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms