RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 NUCB1Q02818 461 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 KARSQ15046 597 aaKnown RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 NCOA1Q15788 1441 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 ESYT1Q9BSJ8 1104 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 UBXN1Q04323 297 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 RASA3Q14644 834 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 IFI16Q16666 785 aaKnown RBP11.71□□□□□ -0.53
SHPRH-206ENST00000438092 KRT79Q5XKE5 535 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 TMTC2Q8N394 836 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 RAB3IL1Q8TBN0 382 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 PPM1EQ8WY54 764 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 PYM1Q9BRP8 204 aaKnown RBP11.71□□□□□ -0.53
SHPRH-206ENST00000438092 ZSCAN16Q9H4T2 348 aaPredicted RBP11.71□□□□□ -0.53
SHPRH-206ENST00000438092 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 MBD4O95243 580 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 CPA1P15085 419 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 TIMM10P62072 90 aa11.71□□□□□ -0.53
SHPRH-206ENST00000438092 GNAQP50148 359 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 USP37Q86T82 979 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 CPXCR1Q8N123 301 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 KLHDC4Q8TBB5 520 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 CCDC114Q96M63 670 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.71□□□□□ -0.54
SHPRH-206ENST00000438092 V9GYY5 206 aaPredicted RBP11.71□□□□□ -0.54
SHPRH-206ENST00000438092 PSMA7O14818 248 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 CEP112Q8N8E3 955 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 MRRFQ96E11 262 aaKnown RBP11.71□□□□□ -0.54
SHPRH-206ENST00000438092 TMOD4Q9NZQ9 345 aa11.71□□□□□ -0.54
SHPRH-206ENST00000438092 VWA3AA6NCI4 1184 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 CSPG5O95196 566 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
SHPRH-206ENST00000438092 ARMT1Q9H993 441 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 RNF34Q969K3 372 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 LRRC45Q96CN5 670 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 STK32BQ9NY57 414 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 CCDC155Q8N6L0 562 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 SELENOSQ9BQE4 189 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 AATFQ9NY61 560 aaKnown RBP eCLIP11.7□□□□□ -0.54
SHPRH-206ENST00000438092 MAPK8IP1Q9UQF2 711 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 RNF113AO15541 343 aaKnown RBP11.7□□□□□ -0.54
SHPRH-206ENST00000438092 BIRC3Q13489 604 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 PCDHB15Q9Y5E8 787 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 DTHD1Q6ZMT9 781 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
SHPRH-206ENST00000438092 EYA3Q99504 573 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 B4E1Z4 1266 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 PPP2R5DQ14738 602 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
SHPRH-206ENST00000438092 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.7□□□□□ -0.54
SHPRH-206ENST00000438092 PPP1R9BQ96SB3 815 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 SELENOOQ9BVL4 669 aa11.7□□□□□ -0.54
SHPRH-206ENST00000438092 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.7□□□□□ -0.547e-8■■□□□ 14.4
SHPRH-206ENST00000438092 KDM5BQ9UGL1 1544 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 CCNT1O60563 726 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 CYLC1P35663 651 aaPredicted RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 DHX29Q7Z478 1369 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 CCDC65Q8IXS2 484 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 KCNG4Q8TDN1 519 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 CCT6AP40227 531 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 UAP1Q16222 522 aaPredicted RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 MAK16Q9BXY0 300 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 RFX1P22670 979 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 CKAP4Q07065 602 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 MCM6Q14566 821 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 DNAJC21Q5F1R6 531 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 B4DLN1 442 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 GCP02774 474 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 MRPL12P52815 198 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 ATP8B2P98198 1209 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 RAD51AP2Q09MP3 1159 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 PPP2R5CQ13362 524 aa11.69□□□□□ -0.54
SHPRH-206ENST00000438092 CGNQ9P2M7 1197 aaKnown RBP11.69□□□□□ -0.54
SHPRH-206ENST00000438092 ITGA6P23229 1130 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 RNASE9P60153 205 aaKnown RBP11.68□□□□□ -0.54
SHPRH-206ENST00000438092 LARGE2Q8N3Y3 721 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 NEK11Q8NG66 645 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
SHPRH-206ENST00000438092 GUCA1BQ9UMX6 200 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 PRDM1O75626 825 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 IFT81Q8WYA0 676 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 LZTFL1Q9NQ48 299 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 TBC1D7Q9P0N9 293 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 CEP83Q9Y592 693 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 RTL9Q8NET4 1388 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 RIMS2Q9UQ26 1411 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
SHPRH-206ENST00000438092 CREB3L3Q68CJ9 461 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 PLCH2O75038 1416 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 SPTLC2O15270 562 aa11.68□□□□□ -0.54
SHPRH-206ENST00000438092 PPP1R21Q6ZMI0 780 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms