RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 A0A0G2JLW4 131 aa23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 BBOX1O75936 387 aa23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 CASTP20810 708 aaKnown RBP23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CHRNA7-202ENST00000437966 XDHP47989 1333 aa23.39■■□□□ 1.33
CHRNA7-202ENST00000437966 TCRBV5S4A2TA0A5A2 114 aa23.39■■□□□ 1.33
CHRNA7-202ENST00000437966 FRAT2O75474 233 aaPredicted RBP23.39■■□□□ 1.33
CHRNA7-202ENST00000437966 ZKSCAN1P17029 563 aaPredicted RBP23.39■■□□□ 1.33
CHRNA7-202ENST00000437966 ABCF2Q9UG63 623 aa23.39■■□□□ 1.33
CHRNA7-202ENST00000437966 U3KPZ7 1027 aaPredicted RBP23.39■■□□□ 1.33
CHRNA7-202ENST00000437966 IRS2Q9Y4H2 1338 aa23.38■■□□□ 1.33
CHRNA7-202ENST00000437966 NRXN2Q9P2S2 1712 aa23.38■■□□□ 1.33
CHRNA7-202ENST00000437966 SRGNP10124 158 aa23.38■■□□□ 1.33
CHRNA7-202ENST00000437966 LARP6Q9BRS8 491 aaKnown RBP23.38■■□□□ 1.33
CHRNA7-202ENST00000437966 JAG2Q9Y219 1238 aa23.38■■□□□ 1.33
CHRNA7-202ENST00000437966 LEMD3Q9Y2U8 911 aa23.38■■□□□ 1.33
CHRNA7-202ENST00000437966 MAP3K12Q12852 859 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 OLFM4Q6UX06 510 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 LRP2BPQ9P2M1 347 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 PPEF1O14829 653 aaPredicted RBP23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 FOXP2O15409 715 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 GPAA1O43292 621 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 HSP90AA1P07900 732 aaKnown RBP23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 PDE6BP35913 854 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 CHAF1AQ13111 956 aaPredicted RBP23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 UBE3CQ15386 1083 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 RNF20Q5VTR2 975 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 DSCC1Q9BVC3 393 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 DENND2AQ9ULE3 1009 aa23.37■■□□□ 1.33
CHRNA7-202ENST00000437966 UFL1O94874 794 aa23.36■■□□□ 1.33
CHRNA7-202ENST00000437966 NPR1P16066 1061 aa23.36■■□□□ 1.33
CHRNA7-202ENST00000437966 TTLL5Q6EMB2 1281 aa23.36■■□□□ 1.33
CHRNA7-202ENST00000437966 CYP21A2P08686 494 aa23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 ILDR1Q86SU0 546 aaPredicted RBP23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 ZNF622Q969S3 477 aaKnown RBP eCLIP23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 MYH7P12883 1935 aa23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 C2CD5Q86YS7 1000 aa23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 TTC14Q96N46 770 aa23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 ZSWIM6Q9HCJ5 1215 aa23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 RAI14Q9P0K7 980 aa23.35■■□□□ 1.33
CHRNA7-202ENST00000437966 POLLQ9UGP5 575 aa23.34■■□□□ 1.33
CHRNA7-202ENST00000437966 GGA1Q9UJY5 639 aa23.34■■□□□ 1.33
CHRNA7-202ENST00000437966 TMX3Q96JJ7 454 aa23.33■■□□□ 1.33
CHRNA7-202ENST00000437966 TM6SF1Q9BZW5 370 aa23.33■■□□□ 1.33
CHRNA7-202ENST00000437966 PDRG1Q9NUG6 133 aa23.33■■□□□ 1.33
CHRNA7-202ENST00000437966 CYP46A1Q9Y6A2 500 aa23.33■■□□□ 1.33
CHRNA7-202ENST00000437966 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 AK2P54819 239 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 RUFY3Q7L099 469 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 SP8Q8IXZ3 490 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 MASTLQ96GX5 879 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 TCEANC2Q96MN5 208 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 CHRNA5P30532 468 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 TBC1D16Q8TBP0 767 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 ARMT1Q9H993 441 aa23.32■■□□□ 1.32
CHRNA7-202ENST00000437966 C6orf229H3BNL8 230 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 MBD4O95243 580 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 FGAP02671 866 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 CYP7A1P22680 504 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 TSGA10IPQ3SY00 556 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 STOX1Q6ZVD7 989 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 ADGRA1Q86SQ6 560 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 MIGA1Q8NAN2 632 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 AIDAQ96BJ3 306 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 STRBPQ96SI9 672 aaKnown RBP23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 ATP6V0A2Q9Y487 856 aa23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 RPAP1Q9BWH6 1393 aaPredicted RBP23.31■■□□□ 1.32
CHRNA7-202ENST00000437966 SEMA3EO15041 775 aa23.3■■□□□ 1.32
CHRNA7-202ENST00000437966 HAND2P61296 217 aa23.3■■□□□ 1.32
CHRNA7-202ENST00000437966 DOCK2Q92608 1830 aa23.3■■□□□ 1.32
CHRNA7-202ENST00000437966 COL11A2P13942 1736 aaPredicted RBP23.3■■□□□ 1.32
CHRNA7-202ENST00000437966 APPP05067 770 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 PSMA5P28066 241 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 ALDH1B1P30837 517 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 MCM2P49736 904 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 NBR1Q14596 966 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 PODXL2Q9NZ53 605 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 ZNF219Q9P2Y4 722 aaPredicted RBP23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 H0YIN7 160 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 DDIT3P35638 169 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 BLOC1S2Q6QNY1 142 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 LCORLQ8N3X6 602 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 ZGPATQ8N5A5 531 aaKnown RBP23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 ZNF384Q8TF68 577 aa23.29■■□□□ 1.32
CHRNA7-202ENST00000437966 RIMBP2O15034 1052 aa23.28■■□□□ 1.32
CHRNA7-202ENST00000437966 PRKAB2O43741 272 aa23.28■■□□□ 1.32
CHRNA7-202ENST00000437966 ZNF804AQ7Z570 1209 aa23.28■■□□□ 1.32
CHRNA7-202ENST00000437966 NEK1Q96PY6 1258 aa23.28■■□□□ 1.32
CHRNA7-202ENST00000437966 RPS6KB1P23443 525 aa23.27■■□□□ 1.32
CHRNA7-202ENST00000437966 C15orf52Q6ZUT6 534 aaKnown RBP23.27■■□□□ 1.32
CHRNA7-202ENST00000437966 TMC4Q7Z404 712 aa23.27■■□□□ 1.32
CHRNA7-202ENST00000437966 TDRD7Q8NHU6 1098 aaKnown RBP23.27■■□□□ 1.32
CHRNA7-202ENST00000437966 QSER1Q2KHR3 1735 aa23.27■■□□□ 1.32
CHRNA7-202ENST00000437966 KRT32Q14532 448 aa23.27■■□□□ 1.32
CHRNA7-202ENST00000437966 CHMP5Q9NZZ3 219 aa23.27■■□□□ 1.32
CHRNA7-202ENST00000437966 E7EWF7 191 aa23.26■■□□□ 1.31
CHRNA7-202ENST00000437966 PRDX5P30044 214 aa23.26■■□□□ 1.31
CHRNA7-202ENST00000437966 CD209Q9NNX6 404 aa23.26■■□□□ 1.31
CHRNA7-202ENST00000437966 CTNNA3Q9UI47 895 aa23.26■■□□□ 1.31
CHRNA7-202ENST00000437966 DYNLL1P63167 89 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms