RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ADD2P35612 726 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 VPS37DQ86XT2 251 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 C2CD5Q86YS7 1000 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 KCNB2Q92953 911 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ATP6V0A2Q9Y487 856 aa16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
HLA-DPA1-243ENST00000437811 M0R2C6 588 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 PDE6AP16499 860 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 UBE3CQ15386 1083 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 STYK1Q6J9G0 422 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 HSCBQ8IWL3 235 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 GGA1Q9UJY5 639 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 CACNA1SQ13698 1873 aa16.3■□□□□ 0.2
HLA-DPA1-243ENST00000437811 H0YIN7 160 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 CAPN15O75808 1086 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 UFL1O94874 794 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 NECTIN1Q15223 517 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 WASHC4Q2M389 1173 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 SNX14Q9Y5W7 946 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 DLEC1Q9Y238 1755 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 MAST2Q6P0Q8 1798 aa16.29■□□□□ 0.2
HLA-DPA1-243ENST00000437811 MAP3K12Q12852 859 aa16.28■□□□□ 0.2
HLA-DPA1-243ENST00000437811 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
HLA-DPA1-243ENST00000437811 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
HLA-DPA1-243ENST00000437811 DUOX1Q9NRD9 1551 aa16.28■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ZNF532Q9HCE3 1301 aa16.28■□□□□ 0.2
HLA-DPA1-243ENST00000437811 TCRBV5S4A2TA0A5A2 114 aa16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ZNF804AQ7Z570 1209 aa16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 ZNF622Q969S3 477 aaKnown RBP eCLIP16.27■□□□□ 0.2
HLA-DPA1-243ENST00000437811 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.19
HLA-DPA1-243ENST00000437811 SLC27A2O14975 620 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 CD2BP2O95400 341 aaKnown RBP16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 PUS7LQ9H0K6 701 aaKnown RBP16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 POLLQ9UGP5 575 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ST18O60284 1047 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 FRAT2O75474 233 aaPredicted RBP16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 CHRNA5P30532 468 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 RNF20Q5VTR2 975 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 MAGEB6Q8N7X4 407 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 TDRD7Q8NHU6 1098 aaKnown RBP16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 CNKSR1Q969H4 720 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 GPR101Q96P66 508 aaPredicted RBP16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 LRP2BPQ9P2M1 347 aa16.26■□□□□ 0.19
HLA-DPA1-243ENST00000437811 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
HLA-DPA1-243ENST00000437811 GPAA1O43292 621 aa16.25■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ATXN8OSP0DMR3 200 aa16.25■□□□□ 0.19
HLA-DPA1-243ENST00000437811 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ZKSCAN1P17029 563 aaPredicted RBP16.25■□□□□ 0.19
HLA-DPA1-243ENST00000437811 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
HLA-DPA1-243ENST00000437811 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 K7ELQ4 463 aaPredicted RBP16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 NEK4P51957 841 aa16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 MPNDQ8N594 471 aa16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 KIAA1551Q9HCM1 1747 aa16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 RAI14Q9P0K7 980 aa16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ABCF2Q9UG63 623 aa16.24■□□□□ 0.19
HLA-DPA1-243ENST00000437811 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 FOXP2O15409 715 aa16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 IGSF3O75054 1194 aa16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 IL1R1P14778 569 aa16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 TSGA10IPQ3SY00 556 aa16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ZBTB7AO95365 584 aa16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 DPP8Q6V1X1 898 aaPredicted RBP16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 WDR66Q8TBY9 1149 aa16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 JAKMIP1Q96N16 626 aaKnown RBP16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
HLA-DPA1-243ENST00000437811 MBD4O95243 580 aa16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 CYP7A1P22680 504 aa16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 KRT32Q14532 448 aa16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 R3HDM1Q15032 1099 aaKnown RBP16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 ADCK5Q3MIX3 580 aa16.21■□□□□ 0.19
HLA-DPA1-243ENST00000437811 SPTY2D1Q68D10 685 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms