RNA–Protein interactions for RNA: ENST00000437366.2

NEFM-203, Transcript of neurofilament medium, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEFM, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-203ENST00000437366 B4E1Z4 1266 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 KCNQ2O43526 872 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 HMGN5P82970 282 aaKnown RBP13.46□□□□□ -0.25
NEFM-203ENST00000437366 TYRO3Q06418 890 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
NEFM-203ENST00000437366 PGBD1Q96JS3 809 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 ARID3AQ99856 593 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 ARFGEF2Q9Y6D5 1785 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 USP28Q96RU2 1077 aa13.46□□□□□ -0.25
NEFM-203ENST00000437366 ORC3Q9UBD5 711 aaPredicted RBP13.46□□□□□ -0.25
NEFM-203ENST00000437366 BCAMP50895 628 aa13.46□□□□□ -0.26
NEFM-203ENST00000437366 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.26
NEFM-203ENST00000437366 RESTQ13127 1097 aa13.46□□□□□ -0.26
NEFM-203ENST00000437366 CCAR1Q8IX12 1150 aaKnown RBP13.46□□□□□ -0.26
NEFM-203ENST00000437366 ZKSCAN3Q9BRR0 538 aa13.46□□□□□ -0.26
NEFM-203ENST00000437366 DNAJC25Q9H1X3 360 aa13.46□□□□□ -0.26
NEFM-203ENST00000437366 LRP2BPQ9P2M1 347 aa13.46□□□□□ -0.26
NEFM-203ENST00000437366 ADAMTS7Q9UKP4 1686 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 ZSCAN25Q6NSZ9 544 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
NEFM-203ENST00000437366 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
NEFM-203ENST00000437366 LMTK3Q96Q04 1460 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
NEFM-203ENST00000437366 SIK1P57059 783 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 NAPBQ9H115 298 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
NEFM-203ENST00000437366 SLC5A1P13866 664 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 IL6STP40189 918 aaPredicted RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 PUM3Q15397 648 aaKnown RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 PHKBQ93100 1093 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 CCDC87Q9NVE4 849 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 PDE6AP16499 860 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 ADD1P35611 737 aaKnown RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 TDO2P48775 406 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 MBD4O95243 580 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 STK38Q15208 465 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 TTF1Q15361 905 aaPredicted RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
NEFM-203ENST00000437366 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 SDF4Q9BRK5 362 aa13.44□□□□□ -0.26
NEFM-203ENST00000437366 KINO60870 393 aaKnown RBP13.43□□□□□ -0.26
NEFM-203ENST00000437366 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
NEFM-203ENST00000437366 ADD2P35612 726 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.43□□□□□ -0.26
NEFM-203ENST00000437366 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 SPATA5Q8NB90 893 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 LPIN2Q92539 896 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 MINDY4BA8MYZ0 360 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 FOXP2O15409 715 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 DHX16O60231 1041 aaKnown RBP13.43□□□□□ -0.26
NEFM-203ENST00000437366 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 FSIP1Q8NA03 581 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
NEFM-203ENST00000437366 PLA2G12BQ9BX93 195 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 JCADQ9P266 1359 aa13.43□□□□□ -0.26
NEFM-203ENST00000437366 A0A1B0GVL5 298 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 WTIPA6NIX2 430 aaPredicted RBP13.42□□□□□ -0.26
NEFM-203ENST00000437366 PRKAB2O43741 272 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 ZNF165P49910 485 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 SLC4A8Q2Y0W8 1093 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 TBC1D10CQ8IV04 446 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 LLPHQ9BRT6 129 aaKnown RBP13.42□□□□□ -0.26
NEFM-203ENST00000437366 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
NEFM-203ENST00000437366 JAG2Q9Y219 1238 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 PKD1L3Q7Z443 1732 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 BCL9O00512 1426 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 CARMIL3Q8ND23 1372 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 ATP2B1P20020 1258 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 METAP2P50579 478 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEFM-203ENST00000437366 RBM10P98175 930 aaKnown RBP13.42□□□□□ -0.26
NEFM-203ENST00000437366 ITPK1Q13572 414 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
NEFM-203ENST00000437366 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 FAM200AQ8TCP9 573 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 ZNF274Q96GC6 653 aaPredicted RBP13.42□□□□□ -0.26
NEFM-203ENST00000437366 C8orf37Q96NL8 207 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 SENP2Q9HC62 589 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 BECN2A8MW95 431 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 GOLGA6L19H0YKK7 550 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 AP5Z1O43299 807 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 MARCKSP29966 332 aaPredicted RBP13.42□□□□□ -0.26
NEFM-203ENST00000437366 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
NEFM-203ENST00000437366 HS1BP3Q53T59 392 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms