RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 COL1A1P02452 1464 aaPredicted RBP16.28■□□□□ 0.2
RPE-208ENST00000436630 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.2
RPE-208ENST00000436630 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.2
RPE-208ENST00000436630 FSD1Q9BTV5 496 aa16.27■□□□□ 0.2
RPE-208ENST00000436630 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.27■□□□□ 0.2
RPE-208ENST00000436630 CD209Q9NNX6 404 aa16.27■□□□□ 0.2
RPE-208ENST00000436630 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 WTIPA6NIX2 430 aaPredicted RBP16.26■□□□□ 0.19
RPE-208ENST00000436630 G3V3G9 751 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 GOLIM4O00461 696 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 SCARF1Q14162 830 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 PODNQ7Z5L7 613 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 TXNRD3Q86VQ6 643 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 WDR66Q8TBY9 1149 aa16.26■□□□□ 0.19
RPE-208ENST00000436630 DICER1Q9UPY3 1922 aaKnown RBP16.25■□□□□ 0.19
RPE-208ENST00000436630 PPIP5K2O43314 1243 aa16.25■□□□□ 0.19
RPE-208ENST00000436630 ZFYP08048 801 aaPredicted RBP16.25■□□□□ 0.19
RPE-208ENST00000436630 ZAP70P43403 619 aa16.25■□□□□ 0.19
RPE-208ENST00000436630 ZSCAN25Q6NSZ9 544 aa16.25■□□□□ 0.19
RPE-208ENST00000436630 TBC1D22AQ8WUA7 517 aa16.25■□□□□ 0.19
RPE-208ENST00000436630 GPR101Q96P66 508 aaPredicted RBP16.25■□□□□ 0.19
RPE-208ENST00000436630 MYO5AQ9Y4I1 1855 aaKnown RBP16.25■□□□□ 0.19
RPE-208ENST00000436630 ZNF646O15015 1829 aaPredicted RBP16.24■□□□□ 0.19
RPE-208ENST00000436630 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
RPE-208ENST00000436630 RAD50Q92878 1312 aa16.24■□□□□ 0.19
RPE-208ENST00000436630 MAP4K4O95819 1239 aaPredicted RBP16.24■□□□□ 0.19
RPE-208ENST00000436630 SPTY2D1Q68D10 685 aaPredicted RBP16.24■□□□□ 0.19
RPE-208ENST00000436630 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
RPE-208ENST00000436630 DIAPH3Q9NSV4 1193 aa16.24■□□□□ 0.19
RPE-208ENST00000436630 RIMBP2O15034 1052 aa16.23■□□□□ 0.19
RPE-208ENST00000436630 CYP2E1P05181 493 aaPredicted RBP16.23■□□□□ 0.19
RPE-208ENST00000436630 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
RPE-208ENST00000436630 MAP3K12Q12852 859 aa16.23■□□□□ 0.19
RPE-208ENST00000436630 PI16Q6UXB8 463 aa16.23■□□□□ 0.19
RPE-208ENST00000436630 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
RPE-208ENST00000436630 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
RPE-208ENST00000436630 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
RPE-208ENST00000436630 NFKBIEO00221 500 aa16.22■□□□□ 0.19
RPE-208ENST00000436630 ECE2O60344 883 aa16.22■□□□□ 0.19
RPE-208ENST00000436630 FKBP1AP62942 108 aaKnown RBP16.22■□□□□ 0.19
RPE-208ENST00000436630 AOC3Q16853 763 aa16.22■□□□□ 0.19
RPE-208ENST00000436630 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
RPE-208ENST00000436630 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
RPE-208ENST00000436630 IQSEC3Q9UPP2 1182 aaPredicted RBP16.22■□□□□ 0.19
RPE-208ENST00000436630 SUGT1Q9Y2Z0 365 aa16.22■□□□□ 0.19
RPE-208ENST00000436630 CHMLP26374 656 aa16.21■□□□□ 0.19
RPE-208ENST00000436630 CHAF1AQ13111 956 aaPredicted RBP16.21■□□□□ 0.19
RPE-208ENST00000436630 NIM1KQ8IY84 436 aa16.21■□□□□ 0.19
RPE-208ENST00000436630 EDC3Q96F86 508 aaKnown RBP16.21■□□□□ 0.19
RPE-208ENST00000436630 ZNF277Q9NRM2 450 aaPredicted RBP16.21■□□□□ 0.19
RPE-208ENST00000436630 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
RPE-208ENST00000436630 SBF1O95248 1867 aa16.2■□□□□ 0.18
RPE-208ENST00000436630 IDH1O75874 414 aaKnown RBP16.2■□□□□ 0.18
RPE-208ENST00000436630 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
RPE-208ENST00000436630 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
RPE-208ENST00000436630 DBNDD1Q9H9R9 158 aa16.2■□□□□ 0.18
RPE-208ENST00000436630 PIH1D3Q9NQM4 214 aaKnown RBP16.2■□□□□ 0.18
RPE-208ENST00000436630 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
RPE-208ENST00000436630 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
RPE-208ENST00000436630 MAST3O60307 1309 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
RPE-208ENST00000436630 MFAP1P55081 439 aaKnown RBP16.19■□□□□ 0.18
RPE-208ENST00000436630 UBE3CQ15386 1083 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 STRIP1Q5VSL9 837 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 JDP2Q8WYK2 163 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 BACH2Q9BYV9 841 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 TIAM2Q8IVF5 1701 aa16.19■□□□□ 0.18
RPE-208ENST00000436630 REC8O95072 547 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 LDHBP07195 334 aaKnown RBP16.18■□□□□ 0.18
RPE-208ENST00000436630 ADD2P35612 726 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 GSTO1P78417 241 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 APPBP2Q92624 585 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 ESYT1Q9BSJ8 1104 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 COL4A5P29400 1685 aa16.18■□□□□ 0.18
RPE-208ENST00000436630 MYH2Q9UKX2 1941 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 USP17L3A6NCW0 530 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 USP17L4A6NCW7 530 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 EPB41L2O43491 1005 aaKnown RBP16.17■□□□□ 0.18
RPE-208ENST00000436630 PDE6AP16499 860 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 GTF2IP78347 998 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 ZMYM1Q5SVZ6 1142 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 SLC9C2Q5TAH2 1124 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 USP17L1Q7RTZ2 530 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
RPE-208ENST00000436630 SLF2Q8IX21 1173 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 UPF2Q9HAU5 1272 aaKnown RBP16.17■□□□□ 0.18
RPE-208ENST00000436630 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
RPE-208ENST00000436630 SGSM2O43147 1006 aa16.16■□□□□ 0.18
RPE-208ENST00000436630 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
RPE-208ENST00000436630 LMNB1P20700 586 aa16.16■□□□□ 0.18
RPE-208ENST00000436630 RASSF7Q02833 373 aa16.16■□□□□ 0.18
RPE-208ENST00000436630 NMIQ13287 307 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms