RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SMARCA5O60264 1052 aaPredicted RBP8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 RAB11FIP3O75154 756 aa8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 MMP10P09238 476 aa8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 HSP90B1P14625 803 aaKnown RBP8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 CNBD1Q8NA66 436 aa8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 TATDN2Q93075 761 aa8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 ZNF594Q96JF6 807 aaPredicted RBP8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 PNMA3Q9UL41 463 aa8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 CHMP3Q9Y3E7 222 aa8.7□□□□□ -1.02
LSM3P3-201ENST00000436601 LILRB3O75022 631 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 SASH1O94885 1247 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 ITGA6P23229 1130 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 IFIT5Q13325 482 aaKnown RBP8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 CCDC57Q2TAC2 916 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 HSP90AB4PQ58FF6 505 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 POTEHQ6S545 545 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 ATG9AQ7Z3C6 839 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 C16orf71Q8IYS4 520 aaPredicted RBP8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 RHPN1Q8TCX5 695 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 PUS3Q9BZE2 481 aaKnown RBP8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 LNPKQ9C0E8 428 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 SIL1Q9H173 461 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 SEC31BQ9NQW1 1179 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 RTL9Q8NET4 1388 aa8.69□□□□□ -1.02
LSM3P3-201ENST00000436601 NUP98P52948 1817 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 ANKRD18BA2A2Z9 1011 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 EYA2O00167 538 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 CIAO1O76071 339 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 G3BP1Q13283 466 aaKnown RBP eCLIP8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 R3HDM1Q15032 1099 aaKnown RBP8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 CCDC152Q4G0S7 254 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 LRRC24Q50LG9 513 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 SLC16A10Q8TF71 515 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 KIF1BPQ96EK5 621 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 NLRP3Q96P20 1036 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 SCUBE2Q9NQ36 999 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 ANKRD36CQ5JPF3 1778 aa8.68□□□□□ -1.02
LSM3P3-201ENST00000436601 KLRG2A4D1S0 409 aaPredicted RBP8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 NPHP1O15259 732 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 RGS3P49796 1198 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 USP46P62068 366 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 ST5P78524 1137 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 OS9Q13438 667 aaPredicted RBP8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 COL24A1Q17RW2 1714 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 CRY2Q49AN0 593 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 RIC1Q4ADV7 1423 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 MAMSTRQ6ZN01 415 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 ERC1Q8IUD2 1116 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 OTUD7AQ8TE49 926 aaPredicted RBP8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 BRIP1Q9BX63 1249 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 IL1RAPL2Q9NP60 686 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 RIPOR2Q9Y4F9 1068 aa8.67□□□□□ -1.02
LSM3P3-201ENST00000436601 AFDNP55196 1824 aaKnown RBP8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 SALL3Q9BXA9 1300 aa8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 IL15P40933 162 aaPredicted RBP8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 TFCP2Q12800 502 aa8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 TAF7LQ5H9L4 462 aa8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 LDHAL6AQ6ZMR3 332 aa8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 CELF1Q92879 486 aaKnown RBP8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 GDPD2Q9HCC8 539 aa8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
LSM3P3-201ENST00000436601 KDM4AO75164 1064 aa8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 POTEJP0CG39 1038 aa8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 HOXA10P31260 410 aaPredicted RBP8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 QPCTQ16769 361 aa8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 RDH13Q8NBN7 331 aa8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 EAF2Q96CJ1 260 aaPredicted RBP8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 BCL11AQ9H165 835 aa8.65□□□□□ -1.02
LSM3P3-201ENST00000436601 C3orf80F5H4A9 247 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 SNPHO15079 494 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 AP1G2O75843 785 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 SRGNP10124 158 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 NDUFV2P19404 249 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 IGHMBP2P38935 993 aaKnown RBP8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 RPS8P62241 208 aaKnown RBP8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 CSPP1Q1MSJ5 1256 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 TNNI3KQ59H18 835 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 DDX46Q7L014 1031 aaKnown RBP8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 ANKRD18AQ8IVF6 992 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 CLASRPQ8N2M8 674 aaKnown RBP8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 VGLL2Q8N8G2 317 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 MPHOSPH8Q99549 860 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 MTFR1LQ9H019 292 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 CNNM1Q9NRU3 951 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 FPGT-TNNI3KV9GXZ4 949 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 COL4A1P02462 1669 aa8.64□□□□□ -1.03
LSM3P3-201ENST00000436601 QSER1Q2KHR3 1735 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms