RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
HMGCL-204ENST00000436439 B4GALNT3Q6L9W6 998 aa13.67□□□□□ -0.22
HMGCL-204ENST00000436439 CCDC136Q96JN2 1154 aa13.67□□□□□ -0.22
HMGCL-204ENST00000436439 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
HMGCL-204ENST00000436439 PITPNM2Q9BZ72 1349 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 IRS2Q9Y4H2 1338 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 SLC10A3P09131 477 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 CHRNDQ07001 517 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 STRIP1Q5VSL9 837 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 PRAMEF18Q5VWM3 479 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 MOB2Q70IA6 237 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
HMGCL-204ENST00000436439 WNT10BO00744 389 aa13.65□□□□□ -0.22
HMGCL-204ENST00000436439 TAF5LO75529 589 aa13.65□□□□□ -0.22
HMGCL-204ENST00000436439 EPHA10Q5JZY3 1008 aa13.65□□□□□ -0.22
HMGCL-204ENST00000436439 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
HMGCL-204ENST00000436439 MCOLN1Q9GZU1 580 aa13.65□□□□□ -0.22
HMGCL-204ENST00000436439 ANKRD2Q9GZV1 360 aa13.65□□□□□ -0.22
HMGCL-204ENST00000436439 ANKRD18BA2A2Z9 1011 aa13.64□□□□□ -0.23
HMGCL-204ENST00000436439 TTLL5Q6EMB2 1281 aa13.64□□□□□ -0.23
HMGCL-204ENST00000436439 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
HMGCL-204ENST00000436439 RASAL3Q86YV0 1011 aa13.64□□□□□ -0.23
HMGCL-204ENST00000436439 HELBQ8NG08 1087 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-204ENST00000436439 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 ALDH1L1O75891 902 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 SASH1O94885 1247 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 GTF2IP78347 998 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 KIAA0825Q8IV33 1275 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 CSRNP1Q96S65 589 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 CD209Q9NNX6 404 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
HMGCL-204ENST00000436439 TRPA1O75762 1119 aa13.62□□□□□ -0.23
HMGCL-204ENST00000436439 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
HMGCL-204ENST00000436439 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
HMGCL-204ENST00000436439 OGFOD1Q8N543 542 aa13.62□□□□□ -0.23
HMGCL-204ENST00000436439 ZNF594Q96JF6 807 aaPredicted RBP13.62□□□□□ -0.23
HMGCL-204ENST00000436439 RNF186Q9NXI6 227 aa13.62□□□□□ -0.23
HMGCL-204ENST00000436439 UBE2Q2LH0YL09 131 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 GNAI3P08754 354 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 KCNJ4P48050 445 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 FKBP1BP68106 108 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 DGKZQ13574 1117 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 CERS5Q8N5B7 392 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 ZBED3Q96IU2 234 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-204ENST00000436439 SAGE1Q9NXZ1 904 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 PCDHAC2Q9Y5I4 1007 aa13.61□□□□□ -0.23
HMGCL-204ENST00000436439 ARAP2Q8WZ64 1704 aa13.6□□□□□ -0.23
HMGCL-204ENST00000436439 GRM8O00222 908 aa13.6□□□□□ -0.23
HMGCL-204ENST00000436439 C15orf52Q6ZUT6 534 aaKnown RBP13.6□□□□□ -0.23
HMGCL-204ENST00000436439 USP44Q9H0E7 712 aa13.6□□□□□ -0.23
HMGCL-204ENST00000436439 UTYO14607 1347 aa13.6□□□□□ -0.23
HMGCL-204ENST00000436439 HDAC1Q13547 482 aaPredicted RBP13.59□□□□□ -0.23
HMGCL-204ENST00000436439 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
HMGCL-204ENST00000436439 KAZALD1Q96I82 304 aa13.59□□□□□ -0.23
HMGCL-204ENST00000436439 MEIS3Q99687 375 aa13.59□□□□□ -0.23
HMGCL-204ENST00000436439 FZD1Q9UP38 647 aa13.59□□□□□ -0.23
HMGCL-204ENST00000436439 LAMB1P07942 1786 aa13.59□□□□□ -0.23
HMGCL-204ENST00000436439 IL1R1P14778 569 aa13.58□□□□□ -0.23
HMGCL-204ENST00000436439 PRKG1Q13976 671 aa13.58□□□□□ -0.23
HMGCL-204ENST00000436439 SUCLG2Q96I99 432 aa13.58□□□□□ -0.23
HMGCL-204ENST00000436439 HDAC9Q9UKV0 1011 aa13.58□□□□□ -0.23
HMGCL-204ENST00000436439 HDAC5Q9UQL6 1122 aa13.58□□□□□ -0.23
HMGCL-204ENST00000436439 JAG2Q9Y219 1238 aa13.58□□□□□ -0.23
HMGCL-204ENST00000436439 AOX1Q06278 1338 aa13.58□□□□□ -0.24
HMGCL-204ENST00000436439 F8W031 263 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-204ENST00000436439 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-204ENST00000436439 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.24
HMGCL-204ENST00000436439 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
HMGCL-204ENST00000436439 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-204ENST00000436439 PUS3Q9BZE2 481 aaKnown RBP13.58□□□□□ -0.24
HMGCL-204ENST00000436439 RWDD1Q9H446 243 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-204ENST00000436439 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-204ENST00000436439 SSC5DA1L4H1 1573 aa13.57□□□□□ -0.24
HMGCL-204ENST00000436439 GNAI2P04899 355 aa13.57□□□□□ -0.24
HMGCL-204ENST00000436439 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
HMGCL-204ENST00000436439 RGS19P49795 217 aa13.57□□□□□ -0.24
HMGCL-204ENST00000436439 MMP14P50281 582 aa13.57□□□□□ -0.24
HMGCL-204ENST00000436439 PTPN12Q05209 780 aaKnown RBP13.57□□□□□ -0.24
HMGCL-204ENST00000436439 MKRN3Q13064 507 aaKnown RBP13.57□□□□□ -0.24
HMGCL-204ENST00000436439 TAF7LQ5H9L4 462 aa13.57□□□□□ -0.24
HMGCL-204ENST00000436439 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
HMGCL-204ENST00000436439 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
HMGCL-204ENST00000436439 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
HMGCL-204ENST00000436439 OTOFQ9HC10 1997 aa13.56□□□□□ -0.24
HMGCL-204ENST00000436439 IGHDP01880 384 aa13.56□□□□□ -0.24
HMGCL-204ENST00000436439 UBTFL1P0CB47 393 aaPredicted RBP13.56□□□□□ -0.24
HMGCL-204ENST00000436439 NF2P35240 595 aa13.56□□□□□ -0.24
HMGCL-204ENST00000436439 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
HMGCL-204ENST00000436439 ANKRD44Q8N8A2 993 aa13.56□□□□□ -0.24
HMGCL-204ENST00000436439 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
HMGCL-204ENST00000436439 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-204ENST00000436439 CLRN2A0PK11 232 aa13.55□□□□□ -0.24
HMGCL-204ENST00000436439 TBC1D8O95759 1140 aa13.55□□□□□ -0.24
HMGCL-204ENST00000436439 FKBP1AP62942 108 aaKnown RBP13.55□□□□□ -0.24
HMGCL-204ENST00000436439 CFAP100Q494V2 611 aa13.55□□□□□ -0.24
HMGCL-204ENST00000436439 CEP85Q6P2H3 762 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms