RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 Q6ZUG5 572 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 CEP112Q8N8E3 955 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 ODF2LQ9ULJ1 636 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 FRMD4BQ9Y2L6 1034 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 NPATQ14207 1427 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 KIF22Q14807 665 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 MAK16Q9BXY0 300 aaKnown RBP12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 ZBTB24O43167 697 aaPredicted RBP12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 DTHD1Q6ZMT9 781 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 MIGA1Q8NAN2 632 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 RPL13P26373 211 aaKnown RBP12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 SPC25Q9HBM1 224 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 HAUS2Q9NVX0 235 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 MAATS1Q7Z4T9 603 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 IP6K1Q92551 441 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 CCDC77Q9BR77 488 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 TRIM6Q9C030 488 aaPredicted RBP12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 USP21Q9UK80 565 aa12.05□□□□□ -0.48
LDLRAD4-204ENST00000435606 NUP160Q12769 1436 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 WDR66Q8TBY9 1149 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 IFT74Q96LB3 600 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 SP4Q02446 784 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 HIBADHP31937 336 aaKnown RBP12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 WDR44Q5JSH3 913 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 GPATCH8Q9UKJ3 1502 aaKnown RBP12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 H7C1D1 291 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 BMS1Q14692 1282 aaKnown RBP12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 ZBED4O75132 1171 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 GPR162Q16538 588 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 ISM2Q6H9L7 571 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 TXNDC16Q9P2K2 825 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 ZMYM3Q14202 1370 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 DISP3Q9P2K9 1392 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 RNMTO43148 476 aaKnown RBP12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 CCDC65Q8IXS2 484 aa12.04□□□□□ -0.48
LDLRAD4-204ENST00000435606 UBASH3AP57075 661 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 PUM3Q15397 648 aaKnown RBP12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 CCDC50Q8IVM0 306 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 FNBP1Q96RU3 617 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 STMN4Q9H169 189 aaPredicted RBP12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 APBA3O96018 575 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 ZNF165P49910 485 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 RBM10P98175 930 aaKnown RBP12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 HACE1Q8IYU2 909 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 KIFAP3Q92845 792 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 TSHZ3Q63HK5 1081 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 DHX37Q8IY37 1157 aaKnown RBP12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 STRN3Q13033 797 aa12.03□□□□□ -0.48
LDLRAD4-204ENST00000435606 HSF2BPO75031 334 aa12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 NUCB1Q02818 461 aa12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 NEK11Q8NG66 645 aa12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 MEIS3Q99687 375 aa12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 FAM107BQ9H098 131 aa12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 SAP30BPQ9UHR5 308 aaKnown RBP12.02□□□□□ -0.48
LDLRAD4-204ENST00000435606 MCM7P33993 719 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 EXOC7Q9UPT5 735 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 ARHGEF6Q15052 776 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 ZSCAN30Q86W11 494 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 MRPS27Q92552 414 aaKnown RBP12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 STX10O60499 249 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 PDE8AO60658 829 aa12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 SNW1Q13573 536 aaKnown RBP12.02□□□□□ -0.49
LDLRAD4-204ENST00000435606 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 MTHFSDQ2M296 383 aaKnown RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 AZI2Q9H6S1 392 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 DNM2P50570 870 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 IRX3P78415 501 aaPredicted RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 PLCB3Q01970 1234 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 PPP1R2P41236 205 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 TMX1Q9H3N1 280 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 CGNQ9P2M7 1197 aaKnown RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 CSADQ9Y600 493 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 SH3BP5O60239 455 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 GJC1P36383 396 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 PDE1AP54750 535 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 SPOUT1Q5T280 376 aaKnown RBP12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 HAUS3Q68CZ6 603 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 ANKRD44Q8N8A2 993 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 PLBD2Q8NHP8 589 aa12.01□□□□□ -0.49
LDLRAD4-204ENST00000435606 JAKMIP2Q96AA8 810 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms