RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 SDF4Q9BRK5 362 aa14.28□□□□□ -0.12
CLDN4-203ENST00000435050 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
CLDN4-203ENST00000435050 ITPK1Q13572 414 aa14.27□□□□□ -0.12
CLDN4-203ENST00000435050 USPL1Q5W0Q7 1092 aa14.27□□□□□ -0.12
CLDN4-203ENST00000435050 ZNF609O15014 1411 aa14.27□□□□□ -0.12
CLDN4-203ENST00000435050 CYP2E1P05181 493 aaPredicted RBP14.27□□□□□ -0.12
CLDN4-203ENST00000435050 SART3Q15020 963 aaKnown RBP14.27□□□□□ -0.12
CLDN4-203ENST00000435050 TMEM67Q5HYA8 995 aa14.27□□□□□ -0.12
CLDN4-203ENST00000435050 UBE2Q2Q8WVN8 375 aa14.27□□□□□ -0.12
CLDN4-203ENST00000435050 TFCP2L1Q9NZI6 479 aa14.27□□□□□ -0.12
CLDN4-203ENST00000435050 WWC3Q9ULE0 1092 aa14.27□□□□□ -0.12
CLDN4-203ENST00000435050 ESPNB1AK53 854 aa14.27□□□□□ -0.13
CLDN4-203ENST00000435050 SPATA5Q8NB90 893 aa14.27□□□□□ -0.13
CLDN4-203ENST00000435050 MYL10Q9BUA6 226 aa14.27□□□□□ -0.13
CLDN4-203ENST00000435050 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.13
CLDN4-203ENST00000435050 USP25Q9UHP3 1055 aa14.27□□□□□ -0.13
CLDN4-203ENST00000435050 SPC24Q8NBT2 197 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
CLDN4-203ENST00000435050 SPATA31A1Q5TZJ5 1347 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 HMGN5P82970 282 aaKnown RBP14.26□□□□□ -0.13
CLDN4-203ENST00000435050 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
CLDN4-203ENST00000435050 UBAC1Q9BSL1 405 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 RANBP6O60518 1105 aaKnown RBP14.26□□□□□ -0.13
CLDN4-203ENST00000435050 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 ERFEQ4G0M1 354 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 PIH1D3Q9NQM4 214 aaKnown RBP14.26□□□□□ -0.13
CLDN4-203ENST00000435050 FSD2A1L4K1 749 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 BECN2A8MW95 431 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 PDE6AP16499 860 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 TRIM28Q13263 835 aaKnown RBP14.26□□□□□ -0.13
CLDN4-203ENST00000435050 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
CLDN4-203ENST00000435050 CHRNDQ07001 517 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 FAM43AQ8N2R8 423 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 GTF3C6Q969F1 213 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 ZNF396Q96N95 335 aaPredicted RBP14.25□□□□□ -0.13
CLDN4-203ENST00000435050 GOLGA8AA7E2F4 631 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 KIAA2012Q0VF49 1180 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 SCRN1Q12765 414 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 STOX1Q6ZVD7 989 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 UBN2Q6ZU65 1347 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
CLDN4-203ENST00000435050 KINO60870 393 aaKnown RBP14.25□□□□□ -0.13
CLDN4-203ENST00000435050 METAP2P50579 478 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLDN4-203ENST00000435050 MFSD6Q6ZSS7 791 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 NOL10Q9BSC4 688 aaKnown RBP14.24□□□□□ -0.13
CLDN4-203ENST00000435050 GOLGA6L19H0YKK7 550 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 RIPOR2Q9Y4F9 1068 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 MROH5Q6ZUA9 1318 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 TPTE2Q6XPS3 522 aa14.24□□□□□ -0.13
CLDN4-203ENST00000435050 EIF5P55010 431 aaKnown RBP14.23□□□□□ -0.13
CLDN4-203ENST00000435050 INCENPQ9NQS7 918 aa14.23□□□□□ -0.13
CLDN4-203ENST00000435050 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
CLDN4-203ENST00000435050 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
CLDN4-203ENST00000435050 PRDM1O75626 825 aa14.23□□□□□ -0.13
CLDN4-203ENST00000435050 SAFBQ15424 915 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLDN4-203ENST00000435050 RASGRF1Q13972 1273 aa14.23□□□□□ -0.13
CLDN4-203ENST00000435050 RAD21O60216 631 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 LETM1O95202 739 aaPredicted RBP14.22□□□□□ -0.13
CLDN4-203ENST00000435050 DZIP1Q86YF9 867 aaKnown RBP14.22□□□□□ -0.13
CLDN4-203ENST00000435050 SLC26A6Q9BXS9 759 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 FBXO3Q9UK99 471 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 MED23Q9ULK4 1368 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 PRKAB2O43741 272 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 CSF1RP07333 972 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 NAA16Q6N069 864 aaPredicted RBP14.22□□□□□ -0.13
CLDN4-203ENST00000435050 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 SDR42E1Q8WUS8 393 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 TMX4Q9H1E5 349 aaPredicted RBP14.22□□□□□ -0.13
CLDN4-203ENST00000435050 RRAGDQ9NQL2 400 aaPredicted RBP14.22□□□□□ -0.13
CLDN4-203ENST00000435050 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 ZNF445P59923 1031 aa14.22□□□□□ -0.13
CLDN4-203ENST00000435050 THRAP3Q9Y2W1 955 aaKnown RBP14.22□□□□□ -0.13
CLDN4-203ENST00000435050 PHKBQ93100 1093 aa14.21□□□□□ -0.13
CLDN4-203ENST00000435050 ZBTB43O43298 467 aa14.21□□□□□ -0.13
CLDN4-203ENST00000435050 INTS5Q6P9B9 1019 aaKnown RBP14.21□□□□□ -0.13
CLDN4-203ENST00000435050 RPGRQ92834 1020 aaKnown RBP14.21□□□□□ -0.13
CLDN4-203ENST00000435050 FTOQ9C0B1 505 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLDN4-203ENST00000435050 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.14
CLDN4-203ENST00000435050 ADD2P35612 726 aa14.21□□□□□ -0.14
CLDN4-203ENST00000435050 PTF1AQ7RTS3 328 aa14.21□□□□□ -0.14
CLDN4-203ENST00000435050 TRIM22Q8IYM9 498 aa14.21□□□□□ -0.14
CLDN4-203ENST00000435050 IARSP41252 1262 aaKnown RBP14.2□□□□□ -0.14
CLDN4-203ENST00000435050 FSIP1Q8NA03 581 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 ALG1Q9BT22 464 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 TRIM5Q9C035 493 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 MAGEB6P1A0A0J9YX57 407 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 TRAPPC3LQ5T215 181 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 GJB4Q9NTQ9 266 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
CLDN4-203ENST00000435050 TRPM3Q9HCF6 1732 aaPredicted RBP14.2□□□□□ -0.14
CLDN4-203ENST00000435050 LIG1P18858 919 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 PDIA3P30101 505 aaKnown RBP14.2□□□□□ -0.14
CLDN4-203ENST00000435050 ADD1P35611 737 aaKnown RBP14.2□□□□□ -0.14
CLDN4-203ENST00000435050 CCAR1Q8IX12 1150 aaKnown RBP14.2□□□□□ -0.14
CLDN4-203ENST00000435050 ZNF34Q8IZ26 560 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms