RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 GPR162Q16538 588 aa28.26■■■□□ 2.11
SMARCAL1-208ENST00000434435 COL4A5P29400 1685 aa28.26■■■□□ 2.11
SMARCAL1-208ENST00000434435 PDS5AQ29RF7 1337 aaKnown RBP28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 GSPT1P15170 499 aaKnown RBP28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 DOK7Q18PE1 504 aa28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 SPATA5Q8NB90 893 aa28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 DNAJC2Q99543 621 aaKnown RBP28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 DBNDD1Q9H9R9 158 aa28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 HMG20BQ9P0W2 317 aa28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 TIAM2Q8IVF5 1701 aa28.25■■■□□ 2.11
SMARCAL1-208ENST00000434435 ECE2O60344 883 aa28.24■■■□□ 2.11
SMARCAL1-208ENST00000434435 BMP2KLQ5H9B9 411 aa28.24■■■□□ 2.11
SMARCAL1-208ENST00000434435 SNRKQ9NRH2 765 aa28.24■■■□□ 2.11
SMARCAL1-208ENST00000434435 MAST2Q6P0Q8 1798 aa28.24■■■□□ 2.11
SMARCAL1-208ENST00000434435 PI16Q6UXB8 463 aa28.23■■■□□ 2.11
SMARCAL1-208ENST00000434435 PODNQ7Z5L7 613 aa28.23■■■□□ 2.11
SMARCAL1-208ENST00000434435 NIM1KQ8IY84 436 aa28.23■■■□□ 2.11
SMARCAL1-208ENST00000434435 TRIM6-TRIM34B2RNG4 842 aa28.22■■■□□ 2.11
SMARCAL1-208ENST00000434435 ZAP70P43403 619 aa28.22■■■□□ 2.11
SMARCAL1-208ENST00000434435 PAG1Q9NWQ8 432 aa28.22■■■□□ 2.11
SMARCAL1-208ENST00000434435 NDUFB9Q9Y6M9 179 aa28.22■■■□□ 2.11
SMARCAL1-208ENST00000434435 MAP4K4O95819 1239 aaPredicted RBP28.21■■■□□ 2.11
SMARCAL1-208ENST00000434435 CHAF1AQ13111 956 aaPredicted RBP28.21■■■□□ 2.11
SMARCAL1-208ENST00000434435 CNTROBQ8N137 903 aa28.21■■■□□ 2.11
SMARCAL1-208ENST00000434435 GOLGB1Q14789 3259 aaKnown RBP28.21■■■□□ 2.11
SMARCAL1-208ENST00000434435 GOLIM4O00461 696 aa28.2■■■□□ 2.1
SMARCAL1-208ENST00000434435 GRIN3BO60391 1043 aa28.2■■■□□ 2.1
SMARCAL1-208ENST00000434435 SDSP20132 328 aa28.19■■■□□ 2.1
SMARCAL1-208ENST00000434435 TTF1Q15361 905 aaPredicted RBP28.19■■■□□ 2.1
SMARCAL1-208ENST00000434435 JDP2Q8WYK2 163 aa28.19■■■□□ 2.1
SMARCAL1-208ENST00000434435 RILPL2Q969X0 211 aa28.19■■■□□ 2.1
SMARCAL1-208ENST00000434435 EVI5LQ96CN4 794 aa28.19■■■□□ 2.1
SMARCAL1-208ENST00000434435 EDC3Q96F86 508 aaKnown RBP28.19■■■□□ 2.1
SMARCAL1-208ENST00000434435 FAM205AQ6ZU69 1335 aa28.18■■■□□ 2.1
SMARCAL1-208ENST00000434435 SRCAPQ6ZRS2 3230 aa28.18■■■□□ 2.1
SMARCAL1-208ENST00000434435 CYP2E1P05181 493 aaPredicted RBP28.18■■■□□ 2.1
SMARCAL1-208ENST00000434435 LMNB1P20700 586 aa28.18■■■□□ 2.1
SMARCAL1-208ENST00000434435 WDR66Q8TBY9 1149 aa28.18■■■□□ 2.1
SMARCAL1-208ENST00000434435 FBXW7Q969H0 707 aa28.17■■■□□ 2.1
SMARCAL1-208ENST00000434435 ZNRF3Q9ULT6 936 aa28.17■■■□□ 2.1
SMARCAL1-208ENST00000434435 PRELPP51888 382 aa28.16■■■□□ 2.1
SMARCAL1-208ENST00000434435 GTF2IP78347 998 aa28.16■■■□□ 2.1
SMARCAL1-208ENST00000434435 ZGPATQ8N5A5 531 aaKnown RBP28.16■■■□□ 2.1
SMARCAL1-208ENST00000434435 ANTXR1Q9H6X2 564 aa28.16■■■□□ 2.1
SMARCAL1-208ENST00000434435 JAG2Q9Y219 1238 aa28.16■■■□□ 2.1
SMARCAL1-208ENST00000434435 SALL1Q9NSC2 1324 aa28.16■■■□□ 2.1
SMARCAL1-208ENST00000434435 YDJCA8MPS7 323 aa28.15■■■□□ 2.1
SMARCAL1-208ENST00000434435 KBTBD3Q8NAB2 608 aa28.15■■■□□ 2.1
SMARCAL1-208ENST00000434435 TBC1D22AQ8WUA7 517 aa28.15■■■□□ 2.1
SMARCAL1-208ENST00000434435 FSD1Q9BTV5 496 aa28.15■■■□□ 2.1
SMARCAL1-208ENST00000434435 RFX7Q2KHR2 1363 aa28.14■■■□□ 2.1
SMARCAL1-208ENST00000434435 TTLL5Q6EMB2 1281 aa28.14■■■□□ 2.1
SMARCAL1-208ENST00000434435 MYH2Q9UKX2 1941 aa28.14■■■□□ 2.09
SMARCAL1-208ENST00000434435 USP17L3A6NCW0 530 aa28.13■■■□□ 2.09
SMARCAL1-208ENST00000434435 USP17L4A6NCW7 530 aa28.13■■■□□ 2.09
SMARCAL1-208ENST00000434435 STRIP1Q5VSL9 837 aa28.13■■■□□ 2.09
SMARCAL1-208ENST00000434435 USP17L1Q7RTZ2 530 aa28.13■■■□□ 2.09
SMARCAL1-208ENST00000434435 PIH1D3Q9NQM4 214 aaKnown RBP28.13■■■□□ 2.09
SMARCAL1-208ENST00000434435 ABCF2Q9UG63 623 aa28.13■■■□□ 2.09
SMARCAL1-208ENST00000434435 TBC1D9Q6ZT07 1266 aa28.12■■■□□ 2.09
SMARCAL1-208ENST00000434435 FKBP1AP62942 108 aaKnown RBP28.11■■■□□ 2.09
SMARCAL1-208ENST00000434435 LRRFIP1Q32MZ4 808 aaKnown RBP28.11■■■□□ 2.09
SMARCAL1-208ENST00000434435 MFSD14BQ5SR56 506 aa28.11■■■□□ 2.09
SMARCAL1-208ENST00000434435 SPTY2D1Q68D10 685 aaPredicted RBP28.11■■■□□ 2.09
SMARCAL1-208ENST00000434435 KCNQ5Q9NR82 932 aa28.11■■■□□ 2.09
SMARCAL1-208ENST00000434435 RNF181Q9P0P0 153 aa28.11■■■□□ 2.09
SMARCAL1-208ENST00000434435 LRP2BPQ9P2M1 347 aa28.11■■■□□ 2.09
SMARCAL1-208ENST00000434435 IDH1O75874 414 aaKnown RBP28.1■■■□□ 2.09
SMARCAL1-208ENST00000434435 MAP3K12Q12852 859 aa28.1■■■□□ 2.09
SMARCAL1-208ENST00000434435 ERICH6Q7L0X2 663 aa28.1■■■□□ 2.09
SMARCAL1-208ENST00000434435 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.1■■■□□ 2.09
SMARCAL1-208ENST00000434435 DCAF8L1A6NGE4 600 aa28.09■■■□□ 2.09
SMARCAL1-208ENST00000434435 RAD17O75943 681 aa28.09■■■□□ 2.09
SMARCAL1-208ENST00000434435 EIF6P56537 245 aaKnown RBP28.09■■■□□ 2.09
SMARCAL1-208ENST00000434435 DACT2Q5SW24 774 aa28.09■■■□□ 2.09
SMARCAL1-208ENST00000434435 TICAM2Q86XR7 235 aa28.09■■■□□ 2.09
SMARCAL1-208ENST00000434435 FZD9O00144 591 aa28.08■■■□□ 2.09
SMARCAL1-208ENST00000434435 IGSF3O75054 1194 aa28.08■■■□□ 2.09
SMARCAL1-208ENST00000434435 LDHBP07195 334 aaKnown RBP28.08■■■□□ 2.09
SMARCAL1-208ENST00000434435 ZSCAN25Q6NSZ9 544 aa28.08■■■□□ 2.09
SMARCAL1-208ENST00000434435 RAI14Q9P0K7 980 aa28.08■■■□□ 2.09
SMARCAL1-208ENST00000434435 SUGT1Q9Y2Z0 365 aa28.08■■■□□ 2.09
SMARCAL1-208ENST00000434435 HIP1O00291 1037 aa28.07■■■□□ 2.08
SMARCAL1-208ENST00000434435 CDC45O75419 566 aa28.07■■■□□ 2.08
SMARCAL1-208ENST00000434435 PRDX5P30044 214 aa28.07■■■□□ 2.08
SMARCAL1-208ENST00000434435 CXCL9Q07325 125 aa28.07■■■□□ 2.08
SMARCAL1-208ENST00000434435 C9orf131Q5VYM1 1079 aa28.07■■■□□ 2.08
SMARCAL1-208ENST00000434435 CIAPIN1Q6FI81 312 aa28.07■■■□□ 2.08
SMARCAL1-208ENST00000434435 MYO3BQ8WXR4 1341 aa28.07■■■□□ 2.08
SMARCAL1-208ENST00000434435 PSMD14O00487 310 aa28.06■■■□□ 2.08
SMARCAL1-208ENST00000434435 ZFYP08048 801 aaPredicted RBP28.06■■■□□ 2.08
SMARCAL1-208ENST00000434435 TNIP1Q15025 636 aa28.06■■■□□ 2.08
SMARCAL1-208ENST00000434435 VIL1P09327 827 aaKnown RBP28.05■■■□□ 2.08
SMARCAL1-208ENST00000434435 DZIP1Q86YF9 867 aaKnown RBP28.05■■■□□ 2.08
SMARCAL1-208ENST00000434435 CERS5Q8N5B7 392 aa28.05■■■□□ 2.08
SMARCAL1-208ENST00000434435 MXD3Q9BW11 206 aa28.05■■■□□ 2.08
SMARCAL1-208ENST00000434435 DIAPH3Q9NSV4 1193 aa28.05■■■□□ 2.08
SMARCAL1-208ENST00000434435 ADAMTSL1Q8N6G6 1762 aa28.04■■■□□ 2.08
SMARCAL1-208ENST00000434435 RSBN1LQ6PCB5 846 aaPredicted RBP28.04■■■□□ 2.08
SMARCAL1-208ENST00000434435 CASC1Q6TDU7 716 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms