RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 IFIT1P09914 478 aaKnown RBP23.47■■□□□ 1.35
RPUSD3-207ENST00000433555 KIF4BQ2VIQ3 1234 aa23.47■■□□□ 1.35
RPUSD3-207ENST00000433555 FAM205AQ6ZU69 1335 aa23.47■■□□□ 1.35
RPUSD3-207ENST00000433555 MYO3BQ8WXR4 1341 aa23.47■■□□□ 1.35
RPUSD3-207ENST00000433555 USP17L8P0C7I0 530 aa23.46■■□□□ 1.35
RPUSD3-207ENST00000433555 RBM26Q5T8P6 1007 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-207ENST00000433555 KIAA0825Q8IV33 1275 aa23.46■■□□□ 1.35
RPUSD3-207ENST00000433555 HTRA3P83110 453 aa23.45■■□□□ 1.34
RPUSD3-207ENST00000433555 FMR1Q06787 632 aaKnown RBP eCLIP23.45■■□□□ 1.34
RPUSD3-207ENST00000433555 SIRT2Q8IXJ6 389 aa23.45■■□□□ 1.34
RPUSD3-207ENST00000433555 CAVIN4Q5BKX8 364 aa23.44■■□□□ 1.34
RPUSD3-207ENST00000433555 CNTROBQ8N137 903 aa23.44■■□□□ 1.34
RPUSD3-207ENST00000433555 MYOZ2Q9NPC6 264 aa23.44■■□□□ 1.34
RPUSD3-207ENST00000433555 A0A1B0GUL7 405 aa23.43■■□□□ 1.34
RPUSD3-207ENST00000433555 PHKA1P46020 1223 aa23.43■■□□□ 1.34
RPUSD3-207ENST00000433555 CHAF1AQ13111 956 aaPredicted RBP23.43■■□□□ 1.34
RPUSD3-207ENST00000433555 GRIK5Q16478 980 aa23.43■■□□□ 1.34
RPUSD3-207ENST00000433555 VPS37DQ86XT2 251 aa23.43■■□□□ 1.34
RPUSD3-207ENST00000433555 PGAP2Q9UHJ9 254 aa23.43■■□□□ 1.34
RPUSD3-207ENST00000433555 NOP58Q9Y2X3 529 aaKnown RBP23.43■■□□□ 1.34
RPUSD3-207ENST00000433555 TRAF5O00463 557 aa23.42■■□□□ 1.34
RPUSD3-207ENST00000433555 SURF6O75683 361 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-207ENST00000433555 TIMM10P62072 90 aa23.42■■□□□ 1.34
RPUSD3-207ENST00000433555 FKBP1AP62942 108 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-207ENST00000433555 G3BP1Q13283 466 aaKnown RBP eCLIP23.42■■□□□ 1.34
RPUSD3-207ENST00000433555 GLIS2Q9BZE0 524 aaPredicted RBP23.42■■□□□ 1.34
RPUSD3-207ENST00000433555 PCDHAC2Q9Y5I4 1007 aa23.42■■□□□ 1.34
RPUSD3-207ENST00000433555 F8W031 263 aaPredicted RBP23.41■■□□□ 1.34
RPUSD3-207ENST00000433555 APLP1P51693 650 aa23.41■■□□□ 1.34
RPUSD3-207ENST00000433555 MFSD14BQ5SR56 506 aa23.41■■□□□ 1.34
RPUSD3-207ENST00000433555 DLK2Q6UY11 383 aa23.41■■□□□ 1.34
RPUSD3-207ENST00000433555 GGA3Q9NZ52 723 aa23.41■■□□□ 1.34
RPUSD3-207ENST00000433555 EXOC6BQ9Y2D4 811 aa23.41■■□□□ 1.34
RPUSD3-207ENST00000433555 AKAP11Q9UKA4 1901 aa23.4■■□□□ 1.34
RPUSD3-207ENST00000433555 AOX1Q06278 1338 aa23.39■■□□□ 1.34
RPUSD3-207ENST00000433555 OS9Q13438 667 aaPredicted RBP23.39■■□□□ 1.33
RPUSD3-207ENST00000433555 ZC3H15Q8WU90 426 aaKnown RBP23.39■■□□□ 1.33
RPUSD3-207ENST00000433555 XAGE2Q96GT9 111 aa23.39■■□□□ 1.33
RPUSD3-207ENST00000433555 ADM5C9JUS6 153 aa23.38■■□□□ 1.33
RPUSD3-207ENST00000433555 SCARF1Q14162 830 aa23.38■■□□□ 1.33
RPUSD3-207ENST00000433555 NBPF9Q3BBW0 867 aa23.38■■□□□ 1.33
RPUSD3-207ENST00000433555 CCDC102BQ68D86 513 aa23.38■■□□□ 1.33
RPUSD3-207ENST00000433555 RPAP2Q8IXW5 612 aaPredicted RBP23.38■■□□□ 1.33
RPUSD3-207ENST00000433555 ZBED3Q96IU2 234 aaPredicted RBP23.38■■□□□ 1.33
RPUSD3-207ENST00000433555 AKAP2Q9Y2D5 859 aa23.38■■□□□ 1.33
RPUSD3-207ENST00000433555 MYO5AQ9Y4I1 1855 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-207ENST00000433555 TNNI3KQ59H18 835 aa23.37■■□□□ 1.33
RPUSD3-207ENST00000433555 ANGEL2Q5VTE6 544 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-207ENST00000433555 CRBNQ96SW2 442 aa23.37■■□□□ 1.33
RPUSD3-207ENST00000433555 FPGT-TNNI3KV9GXZ4 949 aa23.37■■□□□ 1.33
RPUSD3-207ENST00000433555 WNT10BO00744 389 aa23.36■■□□□ 1.33
RPUSD3-207ENST00000433555 FRAT2O75474 233 aaPredicted RBP23.36■■□□□ 1.33
RPUSD3-207ENST00000433555 OGFOD1Q8N543 542 aa23.36■■□□□ 1.33
RPUSD3-207ENST00000433555 CHMP4BQ9H444 224 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-207ENST00000433555 SCAF8Q9UPN6 1271 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-207ENST00000433555 MAST2Q6P0Q8 1798 aa23.36■■□□□ 1.33
RPUSD3-207ENST00000433555 RASGRF1Q13972 1273 aa23.35■■□□□ 1.33
RPUSD3-207ENST00000433555 NEUROD6Q96NK8 337 aa23.35■■□□□ 1.33
RPUSD3-207ENST00000433555 TLR7Q9NYK1 1049 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-207ENST00000433555 HDAC9Q9UKV0 1011 aa23.35■■□□□ 1.33
RPUSD3-207ENST00000433555 CFAP100Q494V2 611 aa23.34■■□□□ 1.33
RPUSD3-207ENST00000433555 USP48Q86UV5 1035 aa23.34■■□□□ 1.33
RPUSD3-207ENST00000433555 DBNDD2Q9BQY9 259 aa23.34■■□□□ 1.33
RPUSD3-207ENST00000433555 GPR108Q9NPR9 543 aa23.34■■□□□ 1.33
RPUSD3-207ENST00000433555 TTF2Q9UNY4 1162 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-207ENST00000433555 MYH2Q9UKX2 1941 aa23.33■■□□□ 1.33
RPUSD3-207ENST00000433555 KRT26Q7Z3Y9 468 aa23.33■■□□□ 1.33
RPUSD3-207ENST00000433555 TBC1D22AQ8WUA7 517 aa23.33■■□□□ 1.33
RPUSD3-207ENST00000433555 CEP350Q5VT06 3117 aa23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 ZBTB22O15209 634 aa23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 HMMRO75330 724 aa23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 PI16Q6UXB8 463 aa23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 CDC37L1Q7L3B6 337 aa23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 MTMR14Q8NCE2 650 aa23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 DCPSQ96C86 337 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 EAF2Q96CJ1 260 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 DBNLQ9UJU6 430 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 PITPNM2Q9BZ72 1349 aa23.32■■□□□ 1.32
RPUSD3-207ENST00000433555 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 SEMA3EO15041 775 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 CST9Q5W186 159 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 CREBZFQ9NS37 354 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 GNL3LQ9NVN8 582 aaKnown RBP23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 DENND2AQ9ULE3 1009 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 PCDHB15Q9Y5E8 787 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 DOCK2Q92608 1830 aa23.31■■□□□ 1.32
RPUSD3-207ENST00000433555 APBB1O00213 710 aa23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 ARID4AP29374 1257 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 PRDX5P30044 214 aa23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 MMP14P50281 582 aa23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 DLGAP5Q15398 846 aa23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 WDR66Q8TBY9 1149 aa23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 PRMT6Q96LA8 375 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 IL1RAPL2Q9NP60 686 aa23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 PDS5AQ29RF7 1337 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 SALL1Q9NSC2 1324 aa23.3■■□□□ 1.32
RPUSD3-207ENST00000433555 TMEM88BA6NKF7 163 aa23.29■■□□□ 1.32
RPUSD3-207ENST00000433555 CRKP46108 304 aa23.29■■□□□ 1.32
RPUSD3-207ENST00000433555 ERC1Q8IUD2 1116 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms