RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 CHMLP26374 656 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 TYRO3Q06418 890 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 CCDC30Q5VVM6 783 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 TDRD7Q8NHU6 1098 aaKnown RBP9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 UPF3BQ9BZI7 483 aaKnown RBP9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 NRBP1Q9UHY1 535 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 KLRG2A4D1S0 409 aaPredicted RBP9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 LMNB1P20700 586 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 ELF2Q15723 593 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 MAP3K11Q16584 847 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 LUZP1Q86V48 1076 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 TEX2Q8IWB9 1127 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 ZNF34Q8IZ26 560 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 C8orf58Q8NAV2 365 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 CACTINQ8WUQ7 758 aaKnown RBP9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 TTC14Q96N46 770 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 KCND1Q9NSA2 647 aa9.04□□□□□ -0.96
CNKSR3-202ENST00000433165 COL11A2P13942 1736 aaPredicted RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 RAD50Q92878 1312 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 NEMFO60524 1076 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 SRGNP10124 158 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 HSPA4P34932 840 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 PIP4K2AP48426 406 aaPredicted RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 RBM43Q6ZSC3 357 aaKnown RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 PLBD2Q8NHP8 589 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 RPGRQ92834 1020 aaKnown RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 UTP14AQ9BVJ6 771 aaKnown RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 TNRC6CQ9HCJ0 1690 aaKnown RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 PTPRCP08575 1304 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 ELL2O00472 640 aaPredicted RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 HMMRO75330 724 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 SLU7O95391 586 aaKnown RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 MAPK8IP2Q13387 824 aaPredicted RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 CCDC93Q567U6 631 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 RTKN2Q8IZC4 609 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 RBM17Q96I25 401 aaKnown RBP9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 STK31Q9BXU1 1019 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 NUP62CLQ9H1M0 184 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
CNKSR3-202ENST00000433165 ELP1O95163 1332 aa9.02□□□□□ -0.96
CNKSR3-202ENST00000433165 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 PDIA6Q15084 440 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 PTPN14Q15678 1187 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 HLFQ16534 295 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 C9orf131Q5VYM1 1079 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 TTLL7Q6ZT98 887 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 COPS6Q7L5N1 327 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 DRC7Q8IY82 874 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 NLRP3Q96P20 1036 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 TRIM5Q9C035 493 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 KIF2AO00139 706 aaPredicted RBP9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 APBB1O00213 710 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 TCIRG1Q13488 830 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 CCDC144BQ3MJ40 725 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 LRRC8AQ8IWT6 810 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 TAOK3Q9H2K8 898 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 RNF181Q9P0P0 153 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 CLIP2Q9UDT6 1046 aa9.02□□□□□ -0.97
CNKSR3-202ENST00000433165 ANO6Q4KMQ2 910 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 SLC10A5Q5PT55 438 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 SARM1Q6SZW1 724 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 LRP10Q7Z4F1 713 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 ZNF592Q92610 1267 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 CRAMP1Q96RY5 1269 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 MEIS3Q99687 375 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 L2HGDHQ9H9P8 463 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 CHPF2Q9P2E5 772 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 WWC3Q9ULE0 1092 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 LIMCH1Q9UPQ0 1083 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
CNKSR3-202ENST00000433165 USP27XA6NNY8 438 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 PNMA6AP0CW24 399 aaPredicted RBP9□□□□□ -0.97
CNKSR3-202ENST00000433165 PLA2G4AP47712 749 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 CRY2Q49AN0 593 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 DPY19L2Q6NUT2 758 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 TXLNBQ8N3L3 684 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 STAP2Q9UGK3 403 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 NOL12Q9UGY1 213 aaKnown RBP eCLIP9□□□□□ -0.97
CNKSR3-202ENST00000433165 V9GYY5 206 aaPredicted RBP9□□□□□ -0.97
CNKSR3-202ENST00000433165 SH3TC1Q8TE82 1336 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 TIAM2Q8IVF5 1701 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 FER1L6Q2WGJ9 1857 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 ZRANB2O95218 330 aaKnown RBP eCLIP9□□□□□ -0.97
CNKSR3-202ENST00000433165 NTSR2O95665 410 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 CAVIN2O95810 425 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 HOXA10P31260 410 aaPredicted RBP9□□□□□ -0.97
CNKSR3-202ENST00000433165 AK2P54819 239 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 C1QTNF8P60827 252 aa9□□□□□ -0.97
CNKSR3-202ENST00000433165 AIMP1Q12904 312 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms