RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 PRKG1Q13976 671 aa22.33■■□□□ 1.17
CNOT9-204ENST00000432877 WDR63Q8IWG1 891 aa22.33■■□□□ 1.17
CNOT9-204ENST00000432877 IRS2Q9Y4H2 1338 aa22.32■■□□□ 1.16
CNOT9-204ENST00000432877 FOXO4P98177 505 aa22.32■■□□□ 1.16
CNOT9-204ENST00000432877 PRPF38BQ5VTL8 546 aaKnown RBP22.32■■□□□ 1.16
CNOT9-204ENST00000432877 TNRC18O15417 2968 aaPredicted RBP22.31■■□□□ 1.16
CNOT9-204ENST00000432877 TAF5LO75529 589 aa22.31■■□□□ 1.16
CNOT9-204ENST00000432877 CERS5Q8N5B7 392 aa22.31■■□□□ 1.16
CNOT9-204ENST00000432877 FANCIQ9NVI1 1328 aa22.31■■□□□ 1.16
CNOT9-204ENST00000432877 IFNL1Q8IU54 200 aa22.3■■□□□ 1.16
CNOT9-204ENST00000432877 MYH3P11055 1940 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 SPDYE2BA6NHP3 402 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 SPDYE6P0CI01 402 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 CCDC57Q2TAC2 916 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 CFAP100Q494V2 611 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 CCDC184Q52MB2 194 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 BEND3Q5T5X7 828 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 HELBQ8NG08 1087 aaPredicted RBP22.29■■□□□ 1.16
CNOT9-204ENST00000432877 CHMP3Q9Y3E7 222 aa22.29■■□□□ 1.16
CNOT9-204ENST00000432877 SNAP23O00161 211 aa22.28■■□□□ 1.16
CNOT9-204ENST00000432877 IREB2P48200 963 aaKnown RBP22.28■■□□□ 1.16
CNOT9-204ENST00000432877 OTUD7BQ6GQQ9 843 aa22.28■■□□□ 1.16
CNOT9-204ENST00000432877 PRMT6Q96LA8 375 aaPredicted RBP22.28■■□□□ 1.16
CNOT9-204ENST00000432877 R3HDMLQ9H3Y0 253 aa22.28■■□□□ 1.16
CNOT9-204ENST00000432877 TAF7LQ5H9L4 462 aa22.27■■□□□ 1.16
CNOT9-204ENST00000432877 LMBR1LQ6UX01 489 aa22.27■■□□□ 1.16
CNOT9-204ENST00000432877 LDHAL6AQ6ZMR3 332 aa22.27■■□□□ 1.16
CNOT9-204ENST00000432877 WNK4Q96J92 1243 aa22.27■■□□□ 1.16
CNOT9-204ENST00000432877 F8W031 263 aaPredicted RBP22.26■■□□□ 1.15
CNOT9-204ENST00000432877 TNFAIP1Q13829 316 aa22.26■■□□□ 1.15
CNOT9-204ENST00000432877 INTS3Q68E01 1043 aaKnown RBP22.26■■□□□ 1.15
CNOT9-204ENST00000432877 GRM8O00222 908 aa22.25■■□□□ 1.15
CNOT9-204ENST00000432877 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
CNOT9-204ENST00000432877 UBE4AQ14139 1066 aa22.25■■□□□ 1.15
CNOT9-204ENST00000432877 CNNM1Q9NRU3 951 aa22.25■■□□□ 1.15
CNOT9-204ENST00000432877 FAM205AQ6ZU69 1335 aa22.25■■□□□ 1.15
CNOT9-204ENST00000432877 PDE4DIPQ5VU43 2346 aa22.24■■□□□ 1.15
CNOT9-204ENST00000432877 CLRN2A0PK11 232 aa22.24■■□□□ 1.15
CNOT9-204ENST00000432877 F6X3S4 739 aa22.24■■□□□ 1.15
CNOT9-204ENST00000432877 RBM5P52756 815 aaKnown RBP eCLIP22.24■■□□□ 1.15
CNOT9-204ENST00000432877 ANKRD13AQ8IZ07 590 aa22.24■■□□□ 1.15
CNOT9-204ENST00000432877 VEZTQ9HBM0 779 aa22.24■■□□□ 1.15
CNOT9-204ENST00000432877 C9orf78Q9NZ63 289 aaPredicted RBP22.24■■□□□ 1.15
CNOT9-204ENST00000432877 SERPINA10Q9UK55 444 aa22.24■■□□□ 1.15
CNOT9-204ENST00000432877 FZD1Q9UP38 647 aa22.24■■□□□ 1.15
CNOT9-204ENST00000432877 ZNF646O15015 1829 aaPredicted RBP22.24■■□□□ 1.15
CNOT9-204ENST00000432877 USP2O75604 605 aaPredicted RBP22.23■■□□□ 1.15
CNOT9-204ENST00000432877 ALDH1L1O75891 902 aa22.23■■□□□ 1.15
CNOT9-204ENST00000432877 RASA3Q14644 834 aa22.23■■□□□ 1.15
CNOT9-204ENST00000432877 NBPF12Q5TAG4 269 aaPredicted RBP22.23■■□□□ 1.15
CNOT9-204ENST00000432877 TDRD7Q8NHU6 1098 aaKnown RBP22.23■■□□□ 1.15
CNOT9-204ENST00000432877 ERO1AQ96HE7 468 aa22.23■■□□□ 1.15
CNOT9-204ENST00000432877 CLMNQ96JQ2 1002 aa22.23■■□□□ 1.15
CNOT9-204ENST00000432877 TESPA1A2RU30 521 aaPredicted RBP22.22■■□□□ 1.15
CNOT9-204ENST00000432877 PLIN1O60240 522 aa22.22■■□□□ 1.15
CNOT9-204ENST00000432877 MRS2Q9HD23 443 aa22.22■■□□□ 1.15
CNOT9-204ENST00000432877 TRIM17Q9Y577 477 aa22.22■■□□□ 1.15
CNOT9-204ENST00000432877 PCDHAC2Q9Y5I4 1007 aa22.22■■□□□ 1.15
CNOT9-204ENST00000432877 IGF2BP3O00425 579 aaKnown RBP eCLIP22.21■■□□□ 1.15
CNOT9-204ENST00000432877 HIBADHP31937 336 aaKnown RBP22.21■■□□□ 1.15
CNOT9-204ENST00000432877 EPHA10Q5JZY3 1008 aa22.21■■□□□ 1.15
CNOT9-204ENST00000432877 MFSD14BQ5SR56 506 aa22.21■■□□□ 1.15
CNOT9-204ENST00000432877 OTOP1Q7RTM1 612 aa22.21■■□□□ 1.15
CNOT9-204ENST00000432877 ZNF594Q96JF6 807 aaPredicted RBP22.21■■□□□ 1.15
CNOT9-204ENST00000432877 SPEF2Q9C093 1822 aa22.21■■□□□ 1.15
CNOT9-204ENST00000432877 SPDYE2Q495Y8 402 aa22.2■■□□□ 1.14
CNOT9-204ENST00000432877 SRCIN1Q9C0H9 1055 aa22.19■■□□□ 1.14
CNOT9-204ENST00000432877 ZNF70Q9UC06 446 aaPredicted RBP22.19■■□□□ 1.14
CNOT9-204ENST00000432877 TTF2Q9UNY4 1162 aaKnown RBP22.19■■□□□ 1.14
CNOT9-204ENST00000432877 JAG2Q9Y219 1238 aa22.19■■□□□ 1.14
CNOT9-204ENST00000432877 SSC5DA1L4H1 1573 aa22.19■■□□□ 1.14
CNOT9-204ENST00000432877 GCC1Q96CN9 775 aa22.18■■□□□ 1.14
CNOT9-204ENST00000432877 FAM84BQ96KN1 310 aaPredicted RBP22.18■■□□□ 1.14
CNOT9-204ENST00000432877 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.18■■□□□ 1.14
CNOT9-204ENST00000432877 SALL2Q9Y467 1007 aaPredicted RBP22.18■■□□□ 1.14
CNOT9-204ENST00000432877 GJA5P36382 358 aa22.17■■□□□ 1.14
CNOT9-204ENST00000432877 TNNI2P48788 182 aa22.17■■□□□ 1.14
CNOT9-204ENST00000432877 SP3Q02447 781 aa22.17■■□□□ 1.14
CNOT9-204ENST00000432877 ARHGEF6Q15052 776 aa22.17■■□□□ 1.14
CNOT9-204ENST00000432877 DZIP1LQ8IYY4 767 aaKnown RBP22.17■■□□□ 1.14
CNOT9-204ENST00000432877 PTPN22Q9Y2R2 807 aa22.17■■□□□ 1.14
CNOT9-204ENST00000432877 CACNA1FO60840 1977 aa22.16■■□□□ 1.14
CNOT9-204ENST00000432877 MROH5Q6ZUA9 1318 aa22.16■■□□□ 1.14
CNOT9-204ENST00000432877 HDLBPQ00341 1268 aaKnown RBP22.16■■□□□ 1.14
CNOT9-204ENST00000432877 CRHR2Q13324 411 aa22.16■■□□□ 1.14
CNOT9-204ENST00000432877 PTPN18Q99952 460 aa22.16■■□□□ 1.14
CNOT9-204ENST00000432877 EFCC1Q9HA90 598 aa22.16■■□□□ 1.14
CNOT9-204ENST00000432877 RIPOR2Q9Y4F9 1068 aa22.16■■□□□ 1.14
CNOT9-204ENST00000432877 AOX1Q06278 1338 aa22.15■■□□□ 1.14
CNOT9-204ENST00000432877 GYG1P46976 350 aa22.15■■□□□ 1.14
CNOT9-204ENST00000432877 SLC4A10Q6U841 1118 aa22.15■■□□□ 1.14
CNOT9-204ENST00000432877 OPTNQ96CV9 577 aa22.15■■□□□ 1.14
CNOT9-204ENST00000432877 TEPSINQ96N21 525 aa22.15■■□□□ 1.14
CNOT9-204ENST00000432877 MRIQ9BWK5 157 aa22.15■■□□□ 1.14
CNOT9-204ENST00000432877 TDRD3Q9H7E2 651 aaKnown RBP22.15■■□□□ 1.14
CNOT9-204ENST00000432877 ANP32CO43423 234 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 CRKP46108 304 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 GTF2A2P52657 109 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 MAP3K9P80192 1104 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 FBXO33Q7Z6M2 555 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms