RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 TAF1P21675 1872 aa20.46■□□□□ 0.87
NUP50-209ENST00000432340 USP2O75604 605 aaPredicted RBP20.46■□□□□ 0.87
NUP50-209ENST00000432340 UBE2Q1Q7Z7E8 422 aa20.46■□□□□ 0.87
NUP50-209ENST00000432340 DEFB123Q8N688 67 aa20.46■□□□□ 0.87
NUP50-209ENST00000432340 BRI3BPQ8WY22 251 aa20.46■□□□□ 0.87
NUP50-209ENST00000432340 ELP3Q9H9T3 547 aa20.46■□□□□ 0.87
NUP50-209ENST00000432340 VEZTQ9HBM0 779 aa20.46■□□□□ 0.87
NUP50-209ENST00000432340 FARP2O94887 1054 aaPredicted RBP20.45■□□□□ 0.86
NUP50-209ENST00000432340 GTF2IP78347 998 aa20.45■□□□□ 0.86
NUP50-209ENST00000432340 RAET1EQ8TD07 263 aa20.45■□□□□ 0.86
NUP50-209ENST00000432340 LRCH3Q96II8 777 aa20.45■□□□□ 0.86
NUP50-209ENST00000432340 TRIM47Q96LD4 638 aa20.45■□□□□ 0.86
NUP50-209ENST00000432340 MINPP1Q9UNW1 487 aa20.45■□□□□ 0.86
NUP50-209ENST00000432340 CSADQ9Y600 493 aa20.45■□□□□ 0.86
NUP50-209ENST00000432340 CETPP11597 493 aa20.44■□□□□ 0.86
NUP50-209ENST00000432340 GRK4P32298 578 aa20.44■□□□□ 0.86
NUP50-209ENST00000432340 RIPK4P57078 832 aa20.44■□□□□ 0.86
NUP50-209ENST00000432340 NBPF12Q5TAG4 269 aaPredicted RBP20.44■□□□□ 0.86
NUP50-209ENST00000432340 CCDC85AQ96PX6 553 aaPredicted RBP20.44■□□□□ 0.86
NUP50-209ENST00000432340 ANKRD2Q9GZV1 360 aa20.44■□□□□ 0.86
NUP50-209ENST00000432340 RNF208Q9H0X6 261 aa20.44■□□□□ 0.86
NUP50-209ENST00000432340 BRCA2P51587 3418 aa20.44■□□□□ 0.86
NUP50-209ENST00000432340 SOX1O00570 391 aaPredicted RBP20.43■□□□□ 0.86
NUP50-209ENST00000432340 RASA3Q14644 834 aa20.43■□□□□ 0.86
NUP50-209ENST00000432340 MTFR1Q15390 333 aa20.43■□□□□ 0.86
NUP50-209ENST00000432340 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
NUP50-209ENST00000432340 BIN2Q9UBW5 565 aaPredicted RBP20.43■□□□□ 0.86
NUP50-209ENST00000432340 SSC5DA1L4H1 1573 aa20.42■□□□□ 0.86
NUP50-209ENST00000432340 PSME4Q14997 1843 aa20.42■□□□□ 0.86
NUP50-209ENST00000432340 SPDYE2BA6NHP3 402 aa20.42■□□□□ 0.86
NUP50-209ENST00000432340 SPDYE6P0CI01 402 aa20.42■□□□□ 0.86
NUP50-209ENST00000432340 COL25A1Q9BXS0 654 aaPredicted RBP20.42■□□□□ 0.86
NUP50-209ENST00000432340 SRRDQ9UH36 339 aa20.42■□□□□ 0.86
NUP50-209ENST00000432340 CENPFP49454 3210 aa20.41■□□□□ 0.86
NUP50-209ENST00000432340 CLRN2A0PK11 232 aa20.41■□□□□ 0.86
NUP50-209ENST00000432340 CCL5P13501 91 aa20.41■□□□□ 0.86
NUP50-209ENST00000432340 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
NUP50-209ENST00000432340 KCNJ4P48050 445 aa20.41■□□□□ 0.86
NUP50-209ENST00000432340 MAP3K9P80192 1104 aa20.41■□□□□ 0.86
NUP50-209ENST00000432340 FAM43AQ8N2R8 423 aa20.41■□□□□ 0.86
NUP50-209ENST00000432340 A0A0C4DFX4 3053 aa20.4■□□□□ 0.86
NUP50-209ENST00000432340 COL4A1P02462 1669 aa20.4■□□□□ 0.86
NUP50-209ENST00000432340 BMP8BP34820 402 aa20.4■□□□□ 0.86
NUP50-209ENST00000432340 RANBP2P49792 3224 aaKnown RBP20.4■□□□□ 0.86
NUP50-209ENST00000432340 CTSWP56202 376 aa20.4■□□□□ 0.86
NUP50-209ENST00000432340 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
NUP50-209ENST00000432340 CFAP100Q494V2 611 aa20.4■□□□□ 0.86
NUP50-209ENST00000432340 U2AF1L4Q8WU68 220 aaKnown RBP20.4■□□□□ 0.86
NUP50-209ENST00000432340 ARHGAP39Q9C0H5 1083 aa20.4■□□□□ 0.86
NUP50-209ENST00000432340 RIPOR2Q9Y4F9 1068 aa20.4■□□□□ 0.86
NUP50-209ENST00000432340 RBM5P52756 815 aaKnown RBP eCLIP20.39■□□□□ 0.85
NUP50-209ENST00000432340 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.85
NUP50-209ENST00000432340 STAP2Q9UGK3 403 aa20.39■□□□□ 0.85
NUP50-209ENST00000432340 CHL1O00533 1208 aa20.38■□□□□ 0.85
NUP50-209ENST00000432340 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
NUP50-209ENST00000432340 PSMC4P43686 418 aa20.38■□□□□ 0.85
NUP50-209ENST00000432340 FKBP1AP62942 108 aaKnown RBP20.38■□□□□ 0.85
NUP50-209ENST00000432340 SNAPC2Q13487 334 aa20.38■□□□□ 0.85
NUP50-209ENST00000432340 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.38■□□□□ 0.85
NUP50-209ENST00000432340 MYD88Q99836 296 aa20.38■□□□□ 0.85
NUP50-209ENST00000432340 DDX58O95786 925 aaKnown RBP20.37■□□□□ 0.85
NUP50-209ENST00000432340 TNNI2P48788 182 aa20.37■□□□□ 0.85
NUP50-209ENST00000432340 VGLL4Q14135 290 aa20.37■□□□□ 0.85
NUP50-209ENST00000432340 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.37■□□□□ 0.85
NUP50-209ENST00000432340 SLAIN1Q8ND83 568 aa20.37■□□□□ 0.85
NUP50-209ENST00000432340 CHMP4AQ9BY43 222 aa20.37■□□□□ 0.85
NUP50-209ENST00000432340 CD209Q9NNX6 404 aa20.37■□□□□ 0.85
NUP50-209ENST00000432340 MYPNQ86TC9 1320 aa20.36■□□□□ 0.85
NUP50-209ENST00000432340 SGPL1O95470 568 aa20.36■□□□□ 0.85
NUP50-209ENST00000432340 LRIT3Q3SXY7 679 aa20.36■□□□□ 0.85
NUP50-209ENST00000432340 TXNRD3Q86VQ6 643 aa20.36■□□□□ 0.85
NUP50-209ENST00000432340 ERO1BQ86YB8 467 aa20.36■□□□□ 0.85
NUP50-209ENST00000432340 PRMT6Q96LA8 375 aaPredicted RBP20.36■□□□□ 0.85
NUP50-209ENST00000432340 SPDYE5A6NIY4 337 aa20.35■□□□□ 0.85
NUP50-209ENST00000432340 TTLL11Q8NHH1 800 aa20.35■□□□□ 0.85
NUP50-209ENST00000432340 HOOK2Q96ED9 719 aa20.35■□□□□ 0.85
NUP50-209ENST00000432340 MPHOSPH8Q99549 860 aa20.35■□□□□ 0.85
NUP50-209ENST00000432340 MTMR10Q9NXD2 777 aa20.35■□□□□ 0.85
NUP50-209ENST00000432340 LAMB1P07942 1786 aa20.34■□□□□ 0.85
NUP50-209ENST00000432340 F8W031 263 aaPredicted RBP20.34■□□□□ 0.85
NUP50-209ENST00000432340 OSBPP22059 807 aa20.34■□□□□ 0.85
NUP50-209ENST00000432340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.34■□□□□ 0.85
NUP50-209ENST00000432340 BTBD19C9JJ37 291 aa20.33■□□□□ 0.85
NUP50-209ENST00000432340 TFRCP02786 760 aaKnown RBP20.33■□□□□ 0.85
NUP50-209ENST00000432340 FCGRTP55899 365 aa20.33■□□□□ 0.85
NUP50-209ENST00000432340 KRT24Q2M2I5 525 aa20.33■□□□□ 0.85
NUP50-209ENST00000432340 C17orf99Q6UX52 265 aa20.33■□□□□ 0.85
NUP50-209ENST00000432340 ZNF804AQ7Z570 1209 aa20.33■□□□□ 0.85
NUP50-209ENST00000432340 GREM2Q9H772 168 aa20.33■□□□□ 0.85
NUP50-209ENST00000432340 LAS1LQ9Y4W2 734 aaKnown RBP20.33■□□□□ 0.85
NUP50-209ENST00000432340 SPDYE2Q495Y8 402 aa20.32■□□□□ 0.84
NUP50-209ENST00000432340 CERS5Q8N5B7 392 aa20.32■□□□□ 0.84
NUP50-209ENST00000432340 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
NUP50-209ENST00000432340 GDF15Q99988 308 aa20.32■□□□□ 0.84
NUP50-209ENST00000432340 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
NUP50-209ENST00000432340 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
NUP50-209ENST00000432340 METTL22Q9BUU2 404 aaPredicted RBP20.31■□□□□ 0.84
NUP50-209ENST00000432340 ZNF646O15015 1829 aaPredicted RBP20.31■□□□□ 0.84
NUP50-209ENST00000432340 PPIL2Q13356 520 aa20.3■□□□□ 0.84
NUP50-209ENST00000432340 C15orf52Q6ZUT6 534 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms