RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PDE6AP16499 860 aa19.85■□□□□ 0.77
USHBP1-203ENST00000431146 HAND2P61296 217 aa19.85■□□□□ 0.77
USHBP1-203ENST00000431146 CLEC17AQ6ZS10 378 aa19.85■□□□□ 0.77
USHBP1-203ENST00000431146 BRD1O95696 1058 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 RPS8P62241 208 aaKnown RBP19.84■□□□□ 0.77
USHBP1-203ENST00000431146 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 ZSCAN31Q96LW9 406 aaPredicted RBP19.84■□□□□ 0.77
USHBP1-203ENST00000431146 SH2B1Q9NRF2 756 aaPredicted RBP19.84■□□□□ 0.77
USHBP1-203ENST00000431146 CARMIL3Q8ND23 1372 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 E7EWF7 191 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 STK3Q13188 491 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 Q6ZUG5 572 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 SLC51AQ86UW1 340 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 PROM2Q8N271 834 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 SMC3Q9UQE7 1217 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.84■□□□□ 0.77
USHBP1-203ENST00000431146 DOCK2Q92608 1830 aa19.84■□□□□ 0.77
USHBP1-203ENST00000431146 FGAP02671 866 aa19.83■□□□□ 0.77
USHBP1-203ENST00000431146 SLC27A3Q5K4L6 730 aa19.83■□□□□ 0.77
USHBP1-203ENST00000431146 TCRBV5S4A2TA0A5A2 114 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 TM4SF1P30408 202 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 RBM6P78332 1123 aaKnown RBP19.82■□□□□ 0.76
USHBP1-203ENST00000431146 MAGEB6Q8N7X4 407 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 GYS1P13807 737 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 ADRA2BP18089 450 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 KLRK1P26718 216 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 ANKRD1Q15327 319 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 UBE3CQ15386 1083 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 TXNRD1Q16881 649 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 FOXD4L6Q3SYB3 417 aaPredicted RBP19.82■□□□□ 0.76
USHBP1-203ENST00000431146 FOXD4L3Q6VB84 417 aaPredicted RBP19.82■□□□□ 0.76
USHBP1-203ENST00000431146 CHST3Q7LGC8 479 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 CNBD1Q8NA66 436 aa19.82■□□□□ 0.76
USHBP1-203ENST00000431146 GJB2P29033 226 aa19.81■□□□□ 0.76
USHBP1-203ENST00000431146 ALDH8A1Q9H2A2 487 aaPredicted RBP19.81■□□□□ 0.76
USHBP1-203ENST00000431146 GOLGA6L22H0YM25 854 aa19.81■□□□□ 0.76
USHBP1-203ENST00000431146 UBE4AQ14139 1066 aa19.81■□□□□ 0.76
USHBP1-203ENST00000431146 ZNF772Q68DY9 489 aaPredicted RBP19.81■□□□□ 0.76
USHBP1-203ENST00000431146 MAP3K12Q12852 859 aa19.8■□□□□ 0.76
USHBP1-203ENST00000431146 FGD1P98174 961 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 PRR5LQ6MZQ0 368 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 BRF1Q92994 677 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 COL1A1P02452 1464 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-203ENST00000431146 APPP05067 770 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 SYT1P21579 422 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 IMMTQ16891 758 aaKnown RBP19.79■□□□□ 0.76
USHBP1-203ENST00000431146 DHX32Q7L7V1 743 aaKnown RBP19.79■□□□□ 0.76
USHBP1-203ENST00000431146 VPS37DQ86XT2 251 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 AIDAQ96BJ3 306 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 CTNNA3Q9UI47 895 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 ZNF804BA4D1E1 1349 aa19.79■□□□□ 0.76
USHBP1-203ENST00000431146 FAM84BQ96KN1 310 aaPredicted RBP19.78■□□□□ 0.76
USHBP1-203ENST00000431146 PODXL2Q9NZ53 605 aa19.78■□□□□ 0.76
USHBP1-203ENST00000431146 LRP2BPQ9P2M1 347 aa19.78■□□□□ 0.76
USHBP1-203ENST00000431146 ABCF2Q9UG63 623 aa19.78■□□□□ 0.76
USHBP1-203ENST00000431146 CAVIN4Q5BKX8 364 aa19.78■□□□□ 0.76
USHBP1-203ENST00000431146 TFCP2L1Q9NZI6 479 aa19.78■□□□□ 0.76
USHBP1-203ENST00000431146 TCHHQ07283 1943 aa19.77■□□□□ 0.76
USHBP1-203ENST00000431146 MBD4O95243 580 aa19.77■□□□□ 0.76
USHBP1-203ENST00000431146 HMGB1P09429 215 aaKnown RBP19.77■□□□□ 0.76
USHBP1-203ENST00000431146 ARMT1Q9H993 441 aa19.77■□□□□ 0.76
USHBP1-203ENST00000431146 WDR33Q9C0J8 1336 aaKnown RBP19.77■□□□□ 0.76
USHBP1-203ENST00000431146 STX6O43752 255 aa19.76■□□□□ 0.75
USHBP1-203ENST00000431146 SERPINB2P05120 415 aa19.76■□□□□ 0.75
USHBP1-203ENST00000431146 EXOSC10Q01780 885 aaKnown RBP19.76■□□□□ 0.75
USHBP1-203ENST00000431146 STRBPQ96SI9 672 aaKnown RBP19.76■□□□□ 0.75
USHBP1-203ENST00000431146 ZNF213O14771 459 aa19.76■□□□□ 0.75
USHBP1-203ENST00000431146 PRPF40AO75400 957 aaKnown RBP19.76■□□□□ 0.75
USHBP1-203ENST00000431146 APBA3O96018 575 aa19.76■□□□□ 0.75
USHBP1-203ENST00000431146 APOBRQ0VD83 1088 aa19.76■□□□□ 0.75
USHBP1-203ENST00000431146 MIGA1Q8NAN2 632 aa19.76■□□□□ 0.75
USHBP1-203ENST00000431146 LMBRD1Q9NUN5 540 aa19.76■□□□□ 0.75
USHBP1-203ENST00000431146 GNL3LQ9NVN8 582 aaKnown RBP19.76■□□□□ 0.75
USHBP1-203ENST00000431146 ZNF827Q17R98 1081 aa19.75■□□□□ 0.75
USHBP1-203ENST00000431146 NBPF3Q9H094 633 aa19.75■□□□□ 0.75
USHBP1-203ENST00000431146 DENND2AQ9ULE3 1009 aa19.75■□□□□ 0.75
USHBP1-203ENST00000431146 MYH13Q9UKX3 1938 aa19.75■□□□□ 0.75
USHBP1-203ENST00000431146 TXNRD3Q86VQ6 643 aa19.75■□□□□ 0.75
USHBP1-203ENST00000431146 GPHNQ9NQX3 736 aaPredicted RBP19.75■□□□□ 0.75
USHBP1-203ENST00000431146 ZSCAN22P10073 491 aaPredicted RBP19.74■□□□□ 0.75
USHBP1-203ENST00000431146 DDR1Q08345 913 aa19.74■□□□□ 0.75
USHBP1-203ENST00000431146 ADGRA1Q86SQ6 560 aa19.74■□□□□ 0.75
USHBP1-203ENST00000431146 LCORLQ8N3X6 602 aa19.74■□□□□ 0.75
USHBP1-203ENST00000431146 ANKRD2Q9GZV1 360 aa19.74■□□□□ 0.75
USHBP1-203ENST00000431146 RAI14Q9P0K7 980 aa19.74■□□□□ 0.75
USHBP1-203ENST00000431146 NAP1L2Q9ULW6 460 aaPredicted RBP19.74■□□□□ 0.75
USHBP1-203ENST00000431146 DDX49Q9Y6V7 483 aaKnown RBP19.74■□□□□ 0.75
USHBP1-203ENST00000431146 PRKAB2O43741 272 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 PTMSP20962 102 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 GRAPQ13588 217 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 FBXO33Q7Z6M2 555 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 GRAPLQ8TC17 118 aaPredicted RBP19.73■□□□□ 0.75
USHBP1-203ENST00000431146 GTF3C6Q969F1 213 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 EPB41L4AQ9HCS5 686 aaPredicted RBP19.73■□□□□ 0.75
USHBP1-203ENST00000431146 JAK2O60674 1132 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 SKOR2Q2VWA4 1001 aaPredicted RBP19.73■□□□□ 0.75
USHBP1-203ENST00000431146 TBC1D10CQ8IV04 446 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 NKX2-3Q8TAU0 364 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 ANKIB1Q9P2G1 1089 aa19.73■□□□□ 0.75
USHBP1-203ENST00000431146 VPS37CA5D8V6 355 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms