RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ZMAT5Q9UDW3 170 aaKnown RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 EIF4G1Q04637 1599 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 SETD1BQ9UPS6 1966 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 hCG_1642624A0A1W2PR95 340 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 MLLT1Q03111 559 aaPredicted RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 PDAP1Q13442 181 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 CCDC40Q4G0X9 1142 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 B4GALNT2Q8NHY0 566 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 BRD8Q9H0E9 1235 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 MRS2Q9HD23 443 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 PCDH12Q9NPG4 1184 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 ASAP1Q9ULH1 1129 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 ZCCHC6Q5VYS8 1495 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 NBNO60934 754 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 IDEP14735 1019 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 LMNB2Q03252 620 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 GOLGA2Q08379 1002 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 LAMB3Q13751 1172 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 TAF11Q15544 211 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 CCNG2Q16589 344 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 LRRFIP1Q32MZ4 808 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 ANKRD42Q8N9B4 389 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 GSDMAQ96QA5 445 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 NSRP1Q9H0G5 558 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 GINM1Q9NU53 330 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 ARGLU1Q9NWB6 273 aaPredicted RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 A6NJR5 290 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 MAN1A1P33908 653 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 RRP1P56182 461 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 LBRQ14739 615 aaKnown RBP6.12□□□□□ -1.43
PTPN4-203ENST00000430976 ISM2Q6H9L7 571 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 CATIPQ7Z7H3 387 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 CEP70Q8NHQ1 597 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 FAM76AQ8TAV0 307 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 ANKRD49Q8WVL7 239 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 SH3KBP1Q96B97 665 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 CHST12Q9NRB3 414 aa6.12□□□□□ -1.43
PTPN4-203ENST00000430976 A6NCN8 305 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 POLR3GO15318 223 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-203ENST00000430976 PRMT3O60678 531 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 FAM163BP0C2L3 166 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 SLFNL1Q499Z3 407 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 BRSK2Q8IWQ3 736 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 SPATA5Q8NB90 893 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 TTF2Q9UNY4 1162 aaKnown RBP6.11□□□□□ -1.43
PTPN4-203ENST00000430976 POM121CA8CG34 1229 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 AKR1B10O60218 316 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 CDC25CP30307 473 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 CCNHP51946 323 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-203ENST00000430976 LUZP1Q86V48 1076 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 TRAK1Q9UPV9 953 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 FERP16591 822 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 CNGA1P29973 690 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 TERF2Q15554 542 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 INAQ16352 499 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 SFMBT2Q5VUG0 894 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 CEP128Q6ZU80 1094 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 DNAJB7Q7Z6W7 309 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-203ENST00000430976 PPFIBP1Q86W92 1011 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 NCAPG2Q86XI2 1143 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 SMARCC1Q92922 1105 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-203ENST00000430976 TMEM87BQ96K49 555 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 KIF9Q9HAQ2 790 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 IGSF5Q9NSI5 407 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 ANKIB1Q9P2G1 1089 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 AKAP2Q9Y2D5 859 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 ATP8A1Q9Y2Q0 1164 aa6.11□□□□□ -1.43
PTPN4-203ENST00000430976 TRIM75PA6NK02 468 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 ZMYND10O75800 440 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 RABEP1Q15276 862 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 RABL6Q3YEC7 729 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 NEK5Q6P3R8 708 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 CPLX2Q6PUV4 134 aaKnown RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 MAP3K14Q99558 947 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 ERLIN1O75477 346 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 PYGBP11216 843 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 BASP1P80723 227 aaKnown RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 AKAP17AQ02040 695 aaKnown RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 KIAA0753Q2KHM9 967 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 IFFO2Q5TF58 517 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 SYCP3Q8IZU3 236 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 VPS52Q8N1B4 723 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 TXLNBQ8N3L3 684 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 CENPHQ9H3R5 247 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 DDX56Q9NY93 547 aaKnown RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 IMPDH2P12268 514 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 MCM4P33991 863 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 EFCAB13Q8IY85 973 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 TEX11Q8IYF3 940 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 CTCFLQ8NI51 663 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 PARD3BQ8TEW8 1205 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 PLEKHG4BQ96PX9 1271 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 SENP7Q9BQF6 1050 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 TBC1D2Q9BYX2 928 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 POLR3EQ9NVU0 708 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 FAM50BQ9Y247 325 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 EIF3FO00303 357 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 RHOXF2BP0C7M4 288 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms