RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 FANCIQ9NVI1 1328 aa5.15□□□□□ -1.58
LRRK2-204ENST00000430804 MYCLP12524 364 aaPredicted RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 GNA11P29992 359 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 MKRN3Q13064 507 aaKnown RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 RPAP2Q8IXW5 612 aaPredicted RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 REM2Q8IYK8 340 aaPredicted RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 IFT57Q9NWB7 429 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 TTF2Q9UNY4 1162 aaKnown RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 FLT4P35916 1363 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 ATP8B3O60423 1300 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 BCAMP50895 628 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 RAB3IL1Q8TBN0 382 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 TRIM47Q96LD4 638 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 ZSCAN31Q96LW9 406 aaPredicted RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 C14orf93Q9H972 538 aaKnown RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 IRAK4Q9NWZ3 460 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 TMPOP42166 694 aaKnown RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 CHST3Q7LGC8 479 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 ZBTB8OSQ8IWT0 167 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 CPXCR1Q8N123 301 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 DDX12PQ92771 950 aa5.15□□□□□ -1.59
LRRK2-204ENST00000430804 GTPBP4Q9BZE4 634 aaKnown RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 MAP3K20Q9NYL2 800 aaKnown RBP5.15□□□□□ -1.59
LRRK2-204ENST00000430804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 BMP15O95972 392 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 GPATCH4Q5T3I0 446 aaKnown RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 IFIT1BQ5T764 474 aaKnown RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 XAGE3Q8WTP9 111 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 ORAI2Q96SN7 254 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 NRBP2Q9NSY0 501 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 SYCE3A1L190 88 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 MAP4K4O95819 1239 aaPredicted RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 NAPAP54920 295 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 RPS8P62241 208 aaKnown RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 ZYXQ15942 572 aaKnown RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 NBPF10Q6P3W6 841 aaKnown RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 OTUD6AQ7L8S5 288 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 HAUS6Q7Z4H7 955 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 URGCPQ8TCY9 931 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 USP40Q9NVE5 1235 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 CUL7Q14999 1698 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 NUP160Q12769 1436 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 TCP10L2B9ZVM9 353 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 ALDH1L1O75891 902 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 ARL1P40616 181 aaPredicted RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 TRPC3Q13507 836 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 TFDP1Q14186 410 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 TTLL5Q6EMB2 1281 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 CC2D1AQ6P1N0 951 aaPredicted RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 PPFIBP1Q86W92 1011 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 WDR63Q8IWG1 891 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 CARD10Q9BWT7 1032 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 PLVAPQ9BX97 442 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 FBXO40Q9UH90 709 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 FAM13AO94988 1023 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 IDEP14735 1019 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 GTF2IP78347 998 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 GOLGA8FQ08AF8 430 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 GOLGA8DPQ0D2H9 430 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 TBC1D5Q92609 795 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 NUB1Q9Y5A7 615 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 ABCC11Q96J66 1382 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 PIK3C2GO75747 1445 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 RTL9Q8NET4 1388 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 CCP110O43303 1012 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 PARP1P09874 1014 aaKnown RBP5.14□□□□□ -1.59
LRRK2-204ENST00000430804 APOBRQ0VD83 1088 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 ARRDC4Q8NCT1 418 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 ZNF341Q9BYN7 854 aa5.14□□□□□ -1.59
LRRK2-204ENST00000430804 H0YCG3 227 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 CELF2O95319 508 aaKnown RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 YWHAEP62258 255 aaKnown RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 SETQ01105 290 aaPredicted RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 TMEM67Q5HYA8 995 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 FOXD4L5Q5VV16 416 aaPredicted RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 ARHGEF16Q5VV41 709 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 SDE2Q6IQ49 451 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 HS2ST1Q7LGA3 356 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 FOXD4L4Q8WXT5 416 aaPredicted RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 GTF3C3Q9Y5Q9 886 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 LOC102724428A0A0B4J2F2 783 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 POLR2BP30876 1174 aaKnown RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 SIK1P57059 783 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 AMPD2Q01433 879 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 EXOSC9Q06265 439 aaKnown RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 TTC22Q5TAA0 569 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 FMNL3Q8IVF7 1028 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 ERCC4Q92889 916 aaPredicted RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 FNBP1Q96RU3 617 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 MRPL11Q9Y3B7 192 aaKnown RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 USP8P40818 1118 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 UBA7P41226 1012 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 SLC1A4P43007 532 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 RRP1P56182 461 aaKnown RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 GABPAQ06546 454 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 C9orf131Q5VYM1 1079 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 N4BP2L2Q92802 583 aaPredicted RBP5.13□□□□□ -1.59
LRRK2-204ENST00000430804 SLC7A5P2Q9GIP4 190 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 STIM2Q9P246 746 aa5.13□□□□□ -1.59
LRRK2-204ENST00000430804 FBXL21Q9UKT6 434 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms