RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PDE1AP54750 535 aa13.42□□□□□ -0.26
CHD4-202ENST00000430771 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
CHD4-202ENST00000430771 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
CHD4-202ENST00000430771 ZGPATQ8N5A5 531 aaKnown RBP13.42□□□□□ -0.26
CHD4-202ENST00000430771 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
CHD4-202ENST00000430771 TBC1D22AQ8WUA7 517 aa13.42□□□□□ -0.26
CHD4-202ENST00000430771 FBXW7Q969H0 707 aa13.42□□□□□ -0.26
CHD4-202ENST00000430771 STAP2Q9UGK3 403 aa13.42□□□□□ -0.26
CHD4-202ENST00000430771 FAM205AQ6ZU69 1335 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 MYO3BQ8WXR4 1341 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 FZD9O00144 591 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 MCAMP43121 646 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 PRELPP51888 382 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
CHD4-202ENST00000430771 PLEKHM2Q8IWE5 1019 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 C16orf71Q8IYS4 520 aaPredicted RBP13.41□□□□□ -0.26
CHD4-202ENST00000430771 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 WDR66Q8TBY9 1149 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
CHD4-202ENST00000430771 MYH7P12883 1935 aa13.41□□□□□ -0.26
CHD4-202ENST00000430771 SALL1Q9NSC2 1324 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 USP17L3A6NCW0 530 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 USP17L4A6NCW7 530 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 YDJCA8MPS7 323 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 PDE4AP27815 886 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 FKBP1AP62942 108 aaKnown RBP13.4□□□□□ -0.26
CHD4-202ENST00000430771 TNIP1Q15025 636 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 STRIP1Q5VSL9 837 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 TSHZ3Q63HK5 1081 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 USP17L1Q7RTZ2 530 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
CHD4-202ENST00000430771 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
CHD4-202ENST00000430771 RGS3P49796 1198 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 GTF2IP78347 998 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 TTF1Q15361 905 aaPredicted RBP13.39□□□□□ -0.27
CHD4-202ENST00000430771 MFSD14BQ5SR56 506 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 TTLL5Q6EMB2 1281 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 HAUS7Q99871 368 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 BOLA2Q9H3K6 86 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 HMG20BQ9P0W2 317 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
CHD4-202ENST00000430771 IGSF3O75054 1194 aa13.38□□□□□ -0.27
CHD4-202ENST00000430771 RAD17O75943 681 aa13.38□□□□□ -0.27
CHD4-202ENST00000430771 SCARF1Q14162 830 aa13.38□□□□□ -0.27
CHD4-202ENST00000430771 SPTY2D1Q68D10 685 aaPredicted RBP13.38□□□□□ -0.27
CHD4-202ENST00000430771 PAG1Q9NWQ8 432 aa13.38□□□□□ -0.27
CHD4-202ENST00000430771 JAG2Q9Y219 1238 aa13.38□□□□□ -0.27
CHD4-202ENST00000430771 SUGT1Q9Y2Z0 365 aa13.38□□□□□ -0.27
CHD4-202ENST00000430771 MAST3O60307 1309 aa13.38□□□□□ -0.27
CHD4-202ENST00000430771 RFX7Q2KHR2 1363 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 PSMD14O00487 310 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 RPS12P25398 132 aaKnown RBP13.37□□□□□ -0.27
CHD4-202ENST00000430771 ZAP70P43403 619 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 CXCL9Q07325 125 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 DACT2Q5SW24 774 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
CHD4-202ENST00000430771 PI16Q6UXB8 463 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 GPC2Q8N158 579 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 SNRKQ9NRH2 765 aa13.37□□□□□ -0.27
CHD4-202ENST00000430771 UTRNP46939 3433 aa13.36□□□□□ -0.27
CHD4-202ENST00000430771 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
CHD4-202ENST00000430771 GOLIM4O00461 696 aa13.36□□□□□ -0.27
CHD4-202ENST00000430771 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
CHD4-202ENST00000430771 LRRFIP1Q32MZ4 808 aaKnown RBP13.36□□□□□ -0.27
CHD4-202ENST00000430771 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
CHD4-202ENST00000430771 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
CHD4-202ENST00000430771 AGBL3Q8NEM8 1001 aa13.36□□□□□ -0.27
CHD4-202ENST00000430771 ABCF2Q9UG63 623 aa13.36□□□□□ -0.27
CHD4-202ENST00000430771 WDR90Q96KV7 1748 aa13.36□□□□□ -0.27
CHD4-202ENST00000430771 SCN4AP35499 1836 aa13.35□□□□□ -0.27
CHD4-202ENST00000430771 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
CHD4-202ENST00000430771 CYP2E1P05181 493 aaPredicted RBP13.35□□□□□ -0.27
CHD4-202ENST00000430771 LDHBP07195 334 aaKnown RBP13.35□□□□□ -0.27
CHD4-202ENST00000430771 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
CHD4-202ENST00000430771 DZIP1Q86YF9 867 aaKnown RBP13.35□□□□□ -0.27
CHD4-202ENST00000430771 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
CHD4-202ENST00000430771 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHD4-202ENST00000430771 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
CHD4-202ENST00000430771 HDAC9Q9UKV0 1011 aa13.35□□□□□ -0.27
CHD4-202ENST00000430771 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
CHD4-202ENST00000430771 IDH1O75874 414 aaKnown RBP13.34□□□□□ -0.27
CHD4-202ENST00000430771 MMP14P50281 582 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 MAP3K12Q12852 859 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 BMP2KLQ5H9B9 411 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 ZSCAN25Q6NSZ9 544 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 KCNQ5Q9NR82 932 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
CHD4-202ENST00000430771 MYH2Q9UKX2 1941 aa13.33□□□□□ -0.28
CHD4-202ENST00000430771 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.28
CHD4-202ENST00000430771 LMOD1P29536 600 aaPredicted RBP13.33□□□□□ -0.28
CHD4-202ENST00000430771 PRDX5P30044 214 aa13.33□□□□□ -0.28
CHD4-202ENST00000430771 GSTO1P78417 241 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms