RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 ZSCAN12O43309 604 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 SKIDA1Q1XH10 827 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 GOLGA1Q92805 767 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-209ENST00000429836 MAP2K7O14733 419 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 CYP21A2P08686 494 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 GUCY2CP25092 1073 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 TXLNAP40222 546 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 MAGEA9P43362 315 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 NOM1Q5C9Z4 860 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 TMEM139Q8IV31 216 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 PDILTQ8N807 584 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 TOP1P11387 765 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 STK38Q15208 465 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 E2F4Q16254 413 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 ADALQ6DHV7 355 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 KLHDC4Q8TBB5 520 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 KIFC2Q96AC6 838 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 PFKFB2O60825 505 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 IVLP07476 585 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 ACEP12821 1306 aa12.79□□□□□ -0.36
SEMA4D-209ENST00000429836 CACNA1FO60840 1977 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 CCDC151A5D8V7 595 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 ZNF202O95125 648 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 MTX1Q13505 466 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 KRT32Q14532 448 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 CHST3Q7LGC8 479 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 PNKPQ96T60 521 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 AGLP35573 1532 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 ALDH1L1O75891 902 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 ADKP55263 362 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 AKAP2Q9Y2D5 859 aa12.78□□□□□ -0.36
SEMA4D-209ENST00000429836 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 METP08581 1390 aa12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 ARHGAP6O43182 974 aa12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 AMPHP49418 695 aa12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 BEND6Q5SZJ8 279 aaPredicted RBP12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 LINC00301Q8NCQ3 95 aa12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 ANKZF1Q9H8Y5 726 aa12.77□□□□□ -0.36
SEMA4D-209ENST00000429836 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 KCNQ3O43525 872 aa12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 G3BP1Q13283 466 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 BAG1Q99933 345 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 GJB4Q9NTQ9 266 aa12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 INTS13Q9NVM9 706 aa12.77□□□□□ -0.37
SEMA4D-209ENST00000429836 AKAP12Q02952 1782 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 CHMP4BP1P59074 171 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 MTF1Q14872 753 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 LTV1Q96GA3 475 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 LLPHQ9BRT6 129 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 ABCB6Q9NP58 842 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 FANCLQ9NW38 375 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 RTEL1Q9NZ71 1219 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 A0A1W2PQ27 194 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 A0A1W2PQ64 194 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 A0A1W2PQD8 194 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 TEFQ10587 303 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 BRD3Q15059 726 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 MYCBPQ99417 103 aaPredicted RBP12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 MRPL44Q9H9J2 332 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 ABCC6O95255 1503 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 JCADQ9P266 1359 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 IGSF1Q8N6C5 1336 aa12.76□□□□□ -0.37
SEMA4D-209ENST00000429836 RHOXF2BP0C7M4 288 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 PFKFB1P16118 471 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 JAKMIP3Q5VZ66 844 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 HDXQ7Z353 690 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 RHOXF2Q9BQY4 288 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 KDRP35968 1356 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 IKBKBO14920 756 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 SPTLC2O15270 562 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 CBFA2T2O43439 604 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 MARCKSP29966 332 aaPredicted RBP12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 FCHSD1Q86WN1 690 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms