RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 EPS15P42566 896 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 NLRP6P59044 892 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 SART3Q15020 963 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 MEX3CQ5U5Q3 659 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 GOLGA8KD6RF30 607 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 AMOTL1Q8IY63 956 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 CNOT10Q9H9A5 744 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 TFIP11Q9UBB9 837 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 FAM135BQ49AJ0 1406 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 DLG5Q8TDM6 1919 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 KIAA0753Q2KHM9 967 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 SKIDA1Q1XH10 827 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 KIAA1524Q8TCG1 905 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 FAN1Q9Y2M0 1017 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 ABCC1P33527 1531 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 TET3O43151 1660 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 PER1O15534 1290 aaPredicted RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 GKAP1Q5VSY0 366 aaPredicted RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 WHAMMQ8TF30 809 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 LRRC45Q96CN5 670 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 PRC1O43663 620 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 TTC19Q6DKK2 380 aaPredicted RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 TMX3Q96JJ7 454 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 BTBD11A6QL63 1104 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 HIP1RO75146 1068 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 PDCD7Q8N8D1 485 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 TESK2Q96S53 571 aa8.51□□□□□ -1.05
SYNPO2-202ENST00000429713 ASXL2Q76L83 1435 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 URI1O94763 535 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 KCNG4Q8TDN1 519 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 GJB2P29033 226 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 VPS53Q5VIR6 699 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 SASH1O94885 1247 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 TYRO3Q06418 890 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 RNF187Q5TA31 235 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 PHLDB3Q6NSJ2 640 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 CKAP2LQ8IYA6 745 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 OAS2P29728 719 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 KRT83P78385 493 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 RNASELQ05823 741 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 IQUBQ8NA54 791 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 MAGEC2Q9UBF1 373 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 CEP131Q9UPN4 1083 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 MYH7P12883 1935 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 MYH15Q9Y2K3 1946 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 BCAP29Q9UHQ4 241 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 CFAP100Q494V2 611 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 USP48Q86UV5 1035 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 PIK3R5Q8WYR1 880 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 KRT86O43790 486 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 PPP1R14BQ96C90 147 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 ZNF830Q96NB3 372 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 CD109Q6YHK3 1445 aa8.5□□□□□ -1.05
SYNPO2-202ENST00000429713 RNF8O76064 485 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 ZSCAN22P10073 491 aaPredicted RBP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 SPA17Q15506 151 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 SRLQ86TD4 932 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 TXNDC2Q86VQ3 553 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 MSH6P52701 1360 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 NCOA3Q9Y6Q9 1424 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 GSTA2P09210 222 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 APOBRQ0VD83 1088 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 TEX9Q8N6V9 391 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 PLCB1Q9NQ66 1216 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 SRRM3A6NNA2 597 aaPredicted RBP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 PRPF38AQ8NAV1 312 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 SUFUQ9UMX1 484 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 GNG11P61952 73 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 GIMAP6Q6P9H5 292 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 GBP5Q96PP8 586 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC68Q9H2F9 335 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 VPS18Q9P253 973 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 GOLGA6BA6NDN3 693 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC129Q6ZRS4 1044 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 SAMD9LQ8IVG5 1584 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 PNMA6AP0CW24 399 aaPredicted RBP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 ETF1P62495 437 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 RIPPLY1Q0D2K3 151 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 CCDC155Q8N6L0 562 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 TAF4BQ92750 862 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 OLFM3Q96PB7 478 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 LMNAP02545 664 aaKnown RBP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 U2AF2P26368 475 aaKnown RBP eCLIP8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 ALS2CLQ60I27 953 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 Q9H521 79 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 CTTNBP2NLQ9P2B4 639 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 CFAP73A6NFT4 308 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 ATP5HO75947 161 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 RAPGEF4Q8WZA2 1011 aa8.49□□□□□ -1.05
SYNPO2-202ENST00000429713 ITFG2Q969R8 447 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms