RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 HOXD8P13378 290 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-211ENST00000429595 SIK1P57059 783 aa10.31□□□□□ -0.76
PTPRK-211ENST00000429595 STK32AQ8WU08 396 aa10.31□□□□□ -0.76
PTPRK-211ENST00000429595 KRTAP9-2Q9BYQ4 174 aa10.31□□□□□ -0.76
PTPRK-211ENST00000429595 DIP2CQ9Y2E4 1556 aa10.31□□□□□ -0.76
PTPRK-211ENST00000429595 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-211ENST00000429595 LRP8Q14114 963 aa10.3□□□□□ -0.76
PTPRK-211ENST00000429595 CAPN12Q6ZSI9 719 aa10.3□□□□□ -0.76
PTPRK-211ENST00000429595 TNFRSF10BO14763 440 aa10.29□□□□□ -0.76
PTPRK-211ENST00000429595 PSAPP07602 524 aa10.29□□□□□ -0.76
PTPRK-211ENST00000429595 CDK11AQ9UQ88 783 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-211ENST00000429595 MYO3AQ8NEV4 1616 aa10.29□□□□□ -0.76
PTPRK-211ENST00000429595 SOX18P35713 384 aa10.28□□□□□ -0.76
PTPRK-211ENST00000429595 ELOAQ14241 798 aaKnown RBP10.28□□□□□ -0.76
PTPRK-211ENST00000429595 GDF6Q6KF10 455 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-211ENST00000429595 THEMISQ8N1K5 641 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-211ENST00000429595 MLH3Q9UHC1 1453 aa10.28□□□□□ -0.76
PTPRK-211ENST00000429595 MROH2AA6NES4 1674 aa10.28□□□□□ -0.76
PTPRK-211ENST00000429595 ZNF142P52746 1687 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-211ENST00000429595 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.77
PTPRK-211ENST00000429595 MEX3CQ5U5Q3 659 aaKnown RBP10.27□□□□□ -0.77
PTPRK-211ENST00000429595 ZNF772Q68DY9 489 aaPredicted RBP10.27□□□□□ -0.77
PTPRK-211ENST00000429595 C16orf46Q6P387 395 aa10.27□□□□□ -0.77
PTPRK-211ENST00000429595 GGT6Q6P531 493 aa10.27□□□□□ -0.77
PTPRK-211ENST00000429595 TRIM33Q9UPN9 1127 aa10.27□□□□□ -0.77
PTPRK-211ENST00000429595 ALKQ9UM73 1620 aa10.26□□□□□ -0.77
PTPRK-211ENST00000429595 A2ML1A8K2U0 1454 aa10.26□□□□□ -0.77
PTPRK-211ENST00000429595 HYAL3O43820 417 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-211ENST00000429595 ALX3O95076 343 aa10.26□□□□□ -0.77
PTPRK-211ENST00000429595 GHRHP01286 108 aa10.26□□□□□ -0.77
PTPRK-211ENST00000429595 IL22RA1Q8N6P7 574 aa10.26□□□□□ -0.77
PTPRK-211ENST00000429595 ARHGAP5Q13017 1502 aa10.26□□□□□ -0.77
PTPRK-211ENST00000429595 KDM5CP41229 1560 aa10.26□□□□□ -0.77
PTPRK-211ENST00000429595 KRTAP9-6A0A140TA67 174 aa10.25□□□□□ -0.77
PTPRK-211ENST00000429595 BRD2P25440 801 aaKnown RBP10.25□□□□□ -0.77
PTPRK-211ENST00000429595 RXRBP28702 533 aa10.25□□□□□ -0.77
PTPRK-211ENST00000429595 SETDB1Q15047 1291 aa10.25□□□□□ -0.77
PTPRK-211ENST00000429595 NLRP13Q86W25 1043 aa10.25□□□□□ -0.77
PTPRK-211ENST00000429595 DZIP1LQ8IYY4 767 aaKnown RBP10.25□□□□□ -0.77
PTPRK-211ENST00000429595 MKNK1Q9BUB5 465 aa10.25□□□□□ -0.77
PTPRK-211ENST00000429595 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
PTPRK-211ENST00000429595 MYO5CQ9NQX4 1742 aa10.24□□□□□ -0.77
PTPRK-211ENST00000429595 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-211ENST00000429595 COL13A1Q5TAT6 717 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-211ENST00000429595 PRR23CQ6ZRP0 262 aa10.24□□□□□ -0.77
PTPRK-211ENST00000429595 COL26A1Q96A83 441 aa10.24□□□□□ -0.77
PTPRK-211ENST00000429595 AKTIPQ9H8T0 292 aa10.24□□□□□ -0.77
PTPRK-211ENST00000429595 CXXC1Q9P0U4 656 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-211ENST00000429595 NPHP4O75161 1426 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-211ENST00000429595 LRRC7Q96NW7 1537 aa10.23□□□□□ -0.77
PTPRK-211ENST00000429595 RNF17Q9BXT8 1623 aaKnown RBP10.23□□□□□ -0.77
PTPRK-211ENST00000429595 F8W735 103 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-211ENST00000429595 VWDEQ8N2E2 1590 aa10.22□□□□□ -0.77
PTPRK-211ENST00000429595 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
PTPRK-211ENST00000429595 POLR1AO95602 1720 aaPredicted RBP10.22□□□□□ -0.77
PTPRK-211ENST00000429595 NAA30Q147X3 362 aaPredicted RBP10.22□□□□□ -0.77
PTPRK-211ENST00000429595 NBPF11Q86T75 865 aa10.22□□□□□ -0.77
PTPRK-211ENST00000429595 TMEM130Q8N3G9 435 aa10.22□□□□□ -0.77
PTPRK-211ENST00000429595 MRPL18Q9H0U6 180 aaKnown RBP10.22□□□□□ -0.77
PTPRK-211ENST00000429595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTPRK-211ENST00000429595 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
PTPRK-211ENST00000429595 CLTCQ00610 1675 aaKnown RBP10.22□□□□□ -0.77
PTPRK-211ENST00000429595 TMEM164Q5U3C3 297 aa10.21□□□□□ -0.77
PTPRK-211ENST00000429595 ADAMTSL4Q6UY14 1074 aa10.21□□□□□ -0.77
PTPRK-211ENST00000429595 Q6ZS46 218 aa10.21□□□□□ -0.77
PTPRK-211ENST00000429595 OR13H1Q8NG92 308 aa10.21□□□□□ -0.77
PTPRK-211ENST00000429595 RNF112Q9ULX5 631 aa10.21□□□□□ -0.77
PTPRK-211ENST00000429595 FAM135BQ49AJ0 1406 aa10.21□□□□□ -0.78
PTPRK-211ENST00000429595 ATP11AP98196 1134 aa10.2□□□□□ -0.78
PTPRK-211ENST00000429595 AGGF1Q8N302 714 aaeCLIP10.2□□□□□ -0.78
PTPRK-211ENST00000429595 RBSNQ9H1K0 784 aa10.2□□□□□ -0.78
PTPRK-211ENST00000429595 SRA1Q9HD15 236 aaKnown RBP10.2□□□□□ -0.78
PTPRK-211ENST00000429595 SLAIN2Q9P270 581 aa10.2□□□□□ -0.78
PTPRK-211ENST00000429595 NEURL4Q96JN8 1562 aa10.19□□□□□ -0.78
PTPRK-211ENST00000429595 PRXQ9BXM0 1461 aa10.19□□□□□ -0.78
PTPRK-211ENST00000429595 ZBTB39O15060 712 aa10.19□□□□□ -0.78
PTPRK-211ENST00000429595 ATG7O95352 703 aa10.19□□□□□ -0.78
PTPRK-211ENST00000429595 ZAP70P43403 619 aa10.19□□□□□ -0.78
PTPRK-211ENST00000429595 GALNT11Q8NCW6 608 aa10.19□□□□□ -0.78
PTPRK-211ENST00000429595 TNRQ92752 1358 aa10.18□□□□□ -0.78
PTPRK-211ENST00000429595 SPAG9O60271 1321 aaKnown RBP10.18□□□□□ -0.78
PTPRK-211ENST00000429595 TM4SF5O14894 197 aa10.18□□□□□ -0.78
PTPRK-211ENST00000429595 MAP4K3Q8IVH8 894 aa10.18□□□□□ -0.78
PTPRK-211ENST00000429595 PIK3R5Q8WYR1 880 aa10.18□□□□□ -0.78
PTPRK-211ENST00000429595 CDK13Q14004 1512 aaKnown RBP10.17□□□□□ -0.78
PTPRK-211ENST00000429595 JCADQ9P266 1359 aa10.17□□□□□ -0.78
PTPRK-211ENST00000429595 GPR152Q8TDT2 470 aa10.17□□□□□ -0.78
PTPRK-211ENST00000429595 SYNMO15061 1565 aa10.17□□□□□ -0.78
PTPRK-211ENST00000429595 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
PTPRK-211ENST00000429595 CLIP1P30622 1438 aa10.16□□□□□ -0.78
PTPRK-211ENST00000429595 LINC01387J3KSC0 135 aa10.16□□□□□ -0.78
PTPRK-211ENST00000429595 WISP1O95388 367 aa10.16□□□□□ -0.78
PTPRK-211ENST00000429595 FSTP19883 344 aa10.16□□□□□ -0.78
PTPRK-211ENST00000429595 TXNDC11Q6PKC3 985 aa10.16□□□□□ -0.78
PTPRK-211ENST00000429595 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.16□□□□□ -0.78
PTPRK-211ENST00000429595 CLP1Q92989 425 aaKnown RBP10.16□□□□□ -0.78
PTPRK-211ENST00000429595 PPME1Q9Y570 386 aa10.16□□□□□ -0.78
PTPRK-211ENST00000429595 MED14O60244 1454 aa10.16□□□□□ -0.78
PTPRK-211ENST00000429595 PTCD1O75127 700 aaKnown RBP10.15□□□□□ -0.78
PTPRK-211ENST00000429595 CYP2E1P05181 493 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms