RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 NDUFB9Q9Y6M9 179 aa20.75■□□□□ 0.91
LINC00887-203ENST00000429578 DICER1Q9UPY3 1922 aaKnown RBP20.74■□□□□ 0.91
LINC00887-203ENST00000429578 SCN9AQ15858 1988 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 IL1R1P14778 569 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 PI16Q6UXB8 463 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 EVI5LQ96CN4 794 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 COA1Q9GZY4 146 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 VPS33BQ9H267 617 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 SNRKQ9NRH2 765 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 PAG1Q9NWQ8 432 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 DENND2AQ9ULE3 1009 aa20.74■□□□□ 0.91
LINC00887-203ENST00000429578 IQSEC3Q9UPP2 1182 aaPredicted RBP20.74■□□□□ 0.91
LINC00887-203ENST00000429578 KIF3CO14782 793 aa20.73■□□□□ 0.91
LINC00887-203ENST00000429578 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
LINC00887-203ENST00000429578 COL1A1P02452 1464 aaPredicted RBP20.73■□□□□ 0.91
LINC00887-203ENST00000429578 ZAP70P43403 619 aa20.73■□□□□ 0.91
LINC00887-203ENST00000429578 KIAA2012Q0VF49 1180 aa20.73■□□□□ 0.91
LINC00887-203ENST00000429578 PDS5AQ29RF7 1337 aaKnown RBP20.73■□□□□ 0.91
LINC00887-203ENST00000429578 RILPL2Q969X0 211 aa20.73■□□□□ 0.91
LINC00887-203ENST00000429578 TAOK3Q9H2K8 898 aa20.73■□□□□ 0.91
LINC00887-203ENST00000429578 ZNF646O15015 1829 aaPredicted RBP20.73■□□□□ 0.91
LINC00887-203ENST00000429578 LTBP3Q9NS15 1303 aa20.73■□□□□ 0.91
LINC00887-203ENST00000429578 RASSF7Q02833 373 aa20.73■□□□□ 0.91
LINC00887-203ENST00000429578 GOLIM4O00461 696 aa20.72■□□□□ 0.91
LINC00887-203ENST00000429578 AOC3Q16853 763 aa20.72■□□□□ 0.91
LINC00887-203ENST00000429578 EDC3Q96F86 508 aaKnown RBP20.72■□□□□ 0.91
LINC00887-203ENST00000429578 G3V3G9 751 aa20.71■□□□□ 0.91
LINC00887-203ENST00000429578 NFKBIEO00221 500 aa20.71■□□□□ 0.91
LINC00887-203ENST00000429578 PPIP5K2O43314 1243 aa20.71■□□□□ 0.91
LINC00887-203ENST00000429578 CYP2E1P05181 493 aaPredicted RBP20.71■□□□□ 0.91
LINC00887-203ENST00000429578 DCAF8Q5TAQ9 597 aa20.71■□□□□ 0.91
LINC00887-203ENST00000429578 TTF1Q15361 905 aaPredicted RBP20.7■□□□□ 0.9
LINC00887-203ENST00000429578 PODNQ7Z5L7 613 aa20.7■□□□□ 0.9
LINC00887-203ENST00000429578 ANTXR1Q9H6X2 564 aa20.7■□□□□ 0.9
LINC00887-203ENST00000429578 ZNF277Q9NRM2 450 aaPredicted RBP20.7■□□□□ 0.9
LINC00887-203ENST00000429578 DOK7Q18PE1 504 aa20.7■□□□□ 0.9
LINC00887-203ENST00000429578 KBTBD3Q8NAB2 608 aa20.7■□□□□ 0.9
LINC00887-203ENST00000429578 LMNB1P20700 586 aa20.69■□□□□ 0.9
LINC00887-203ENST00000429578 IARSP41252 1262 aaKnown RBP20.69■□□□□ 0.9
LINC00887-203ENST00000429578 DBNDD1Q9H9R9 158 aa20.69■□□□□ 0.9
LINC00887-203ENST00000429578 NMRK2Q9NPI5 230 aa20.69■□□□□ 0.9
LINC00887-203ENST00000429578 COL4A5P29400 1685 aa20.68■□□□□ 0.9
LINC00887-203ENST00000429578 LARGE2Q8N3Y3 721 aa20.68■□□□□ 0.9
LINC00887-203ENST00000429578 FSD1Q9BTV5 496 aa20.68■□□□□ 0.9
LINC00887-203ENST00000429578 MAST2Q6P0Q8 1798 aa20.68■□□□□ 0.9
LINC00887-203ENST00000429578 ECE2O60344 883 aa20.67■□□□□ 0.9
LINC00887-203ENST00000429578 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
LINC00887-203ENST00000429578 WDR66Q8TBY9 1149 aa20.67■□□□□ 0.9
LINC00887-203ENST00000429578 RFX7Q2KHR2 1363 aa20.67■□□□□ 0.9
LINC00887-203ENST00000429578 FAM205AQ6ZU69 1335 aa20.67■□□□□ 0.9
LINC00887-203ENST00000429578 CDC45O75419 566 aa20.67■□□□□ 0.9
LINC00887-203ENST00000429578 CHAF1AQ13111 956 aaPredicted RBP20.67■□□□□ 0.9
LINC00887-203ENST00000429578 TBC1D9Q6ZT07 1266 aa20.67■□□□□ 0.9
LINC00887-203ENST00000429578 SALL1Q9NSC2 1324 aa20.66■□□□□ 0.9
LINC00887-203ENST00000429578 PIH1D3Q9NQM4 214 aaKnown RBP20.66■□□□□ 0.9
LINC00887-203ENST00000429578 PRELPP51888 382 aa20.65■□□□□ 0.9
LINC00887-203ENST00000429578 ZGPATQ8N5A5 531 aaKnown RBP20.65■□□□□ 0.9
LINC00887-203ENST00000429578 MYH2Q9UKX2 1941 aa20.65■□□□□ 0.9
LINC00887-203ENST00000429578 ZC3H4Q9UPT8 1303 aaKnown RBP20.65■□□□□ 0.9
LINC00887-203ENST00000429578 TOMM70O94826 608 aa20.64■□□□□ 0.9
LINC00887-203ENST00000429578 GTF2IP78347 998 aa20.64■□□□□ 0.9
LINC00887-203ENST00000429578 C8orf34Q49A92 452 aa20.64■□□□□ 0.9
LINC00887-203ENST00000429578 ABCF2Q9UG63 623 aa20.64■□□□□ 0.9
LINC00887-203ENST00000429578 JAG2Q9Y219 1238 aa20.64■□□□□ 0.9
LINC00887-203ENST00000429578 HIP1O00291 1037 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 HSPA6P17066 643 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 CHMLP26374 656 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 LRRFIP1Q32MZ4 808 aaKnown RBP20.64■□□□□ 0.89
LINC00887-203ENST00000429578 TTLL5Q6EMB2 1281 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 CASC1Q6TDU7 716 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 NIM1KQ8IY84 436 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 TBC1D22AQ8WUA7 517 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.64■□□□□ 0.89
LINC00887-203ENST00000429578 LRP2BPQ9P2M1 347 aa20.64■□□□□ 0.89
LINC00887-203ENST00000429578 IDH1O75874 414 aaKnown RBP20.63■□□□□ 0.89
LINC00887-203ENST00000429578 MAP3K12Q12852 859 aa20.63■□□□□ 0.89
LINC00887-203ENST00000429578 JDP2Q8WYK2 163 aa20.63■□□□□ 0.89
LINC00887-203ENST00000429578 YDJCA8MPS7 323 aa20.62■□□□□ 0.89
LINC00887-203ENST00000429578 STRIP1Q5VSL9 837 aa20.62■□□□□ 0.89
LINC00887-203ENST00000429578 ZSCAN25Q6NSZ9 544 aa20.62■□□□□ 0.89
LINC00887-203ENST00000429578 KCNQ5Q9NR82 932 aa20.62■□□□□ 0.89
LINC00887-203ENST00000429578 DIAPH3Q9NSV4 1193 aa20.62■□□□□ 0.89
LINC00887-203ENST00000429578 ZNRF3Q9ULT6 936 aa20.62■□□□□ 0.89
LINC00887-203ENST00000429578 IGSF3O75054 1194 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 ZFYP08048 801 aaPredicted RBP20.61■□□□□ 0.89
LINC00887-203ENST00000429578 MFSD14BQ5SR56 506 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 SPTY2D1Q68D10 685 aaPredicted RBP20.61■□□□□ 0.89
LINC00887-203ENST00000429578 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 TIAM2Q8IVF5 1701 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 USP17L3A6NCW0 530 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 USP17L4A6NCW7 530 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 RNF113AO15541 343 aaKnown RBP20.61■□□□□ 0.89
LINC00887-203ENST00000429578 SLC9C2Q5TAH2 1124 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 USP17L1Q7RTZ2 530 aa20.61■□□□□ 0.89
LINC00887-203ENST00000429578 PRDX5P30044 214 aa20.6■□□□□ 0.89
LINC00887-203ENST00000429578 ADD2P35612 726 aa20.6■□□□□ 0.89
LINC00887-203ENST00000429578 FKBP1AP62942 108 aaKnown RBP20.6■□□□□ 0.89
LINC00887-203ENST00000429578 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
LINC00887-203ENST00000429578 RAI14Q9P0K7 980 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms