RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 KAT6BQ8WYB5 2073 aa16.12■□□□□ 0.17
THBS3-202ENST00000428962 WDR19Q8NEZ3 1342 aa16.11■□□□□ 0.17
THBS3-202ENST00000428962 ARID4AP29374 1257 aaPredicted RBP16.11■□□□□ 0.17
THBS3-202ENST00000428962 MCM5P33992 734 aa16.11■□□□□ 0.17
THBS3-202ENST00000428962 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
THBS3-202ENST00000428962 PARP10Q53GL7 1025 aa16.11■□□□□ 0.17
THBS3-202ENST00000428962 LEO1Q8WVC0 666 aaPredicted RBP16.11■□□□□ 0.17
THBS3-202ENST00000428962 LPIN2Q92539 896 aa16.11■□□□□ 0.17
THBS3-202ENST00000428962 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
THBS3-202ENST00000428962 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
THBS3-202ENST00000428962 AKAP11Q9UKA4 1901 aa16.11■□□□□ 0.17
THBS3-202ENST00000428962 GPAA1O43292 621 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 ADD2P35612 726 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 EVCP57679 992 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 UBE3CQ15386 1083 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 RALYLQ86SE5 291 aaKnown RBP16.1■□□□□ 0.17
THBS3-202ENST00000428962 NUP62CLQ9H1M0 184 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 DDX19AQ9NUU7 478 aaKnown RBP16.1■□□□□ 0.17
THBS3-202ENST00000428962 LAMB2P55268 1798 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 CCDC192P0DO97 292 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 SLC5A1P13866 664 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
THBS3-202ENST00000428962 ATL3Q6DD88 541 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 TTLL5Q6EMB2 1281 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 NCOA7Q8NI08 942 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 FUCA2Q9BTY2 467 aa16.1■□□□□ 0.17
THBS3-202ENST00000428962 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
THBS3-202ENST00000428962 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
THBS3-202ENST00000428962 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
THBS3-202ENST00000428962 SALL1Q9NSC2 1324 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 ZNF213O14771 459 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 FOXP2O15409 715 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 DHX16O60231 1041 aaKnown RBP16.09■□□□□ 0.17
THBS3-202ENST00000428962 FGAP02671 866 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 ATP6V1AP38606 617 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 CRKLP46109 303 aaKnown RBP16.09■□□□□ 0.17
THBS3-202ENST00000428962 FAM173BQ6P4H8 233 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 INTS5Q6P9B9 1019 aaKnown RBP16.09■□□□□ 0.17
THBS3-202ENST00000428962 PI16Q6UXB8 463 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 MYH15Q9Y2K3 1946 aa16.09■□□□□ 0.17
THBS3-202ENST00000428962 A0A0G2JLW4 131 aa16.08■□□□□ 0.17
THBS3-202ENST00000428962 CTDNEP1O95476 244 aa16.08■□□□□ 0.17
THBS3-202ENST00000428962 HCLS1P14317 486 aaPredicted RBP16.08■□□□□ 0.17
THBS3-202ENST00000428962 MAP3K11Q16584 847 aa16.08■□□□□ 0.17
THBS3-202ENST00000428962 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.17
THBS3-202ENST00000428962 CCDC102BQ68D86 513 aa16.08■□□□□ 0.17
THBS3-202ENST00000428962 GIMAP6Q6P9H5 292 aa16.08■□□□□ 0.17
THBS3-202ENST00000428962 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.16
THBS3-202ENST00000428962 RTL9Q8NET4 1388 aa16.08■□□□□ 0.16
THBS3-202ENST00000428962 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.16
THBS3-202ENST00000428962 A0A0G2JS52 829 aa16.08■□□□□ 0.16
THBS3-202ENST00000428962 PRC1O43663 620 aa16.08■□□□□ 0.16
THBS3-202ENST00000428962 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.16
THBS3-202ENST00000428962 PTMAP06454 111 aaKnown RBP16.08■□□□□ 0.16
THBS3-202ENST00000428962 SIK1P57059 783 aa16.08■□□□□ 0.16
THBS3-202ENST00000428962 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
THBS3-202ENST00000428962 MB21D2Q8IYB1 491 aaPredicted RBP16.08■□□□□ 0.16
THBS3-202ENST00000428962 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
THBS3-202ENST00000428962 ZNF396Q96N95 335 aaPredicted RBP16.08■□□□□ 0.16
THBS3-202ENST00000428962 SPATA31A5Q5VU36 1347 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 SPATA31A7Q8IWB4 1347 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 FGFR2P21802 821 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 HAND2P61296 217 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 CCT2P78371 535 aaKnown RBP16.07■□□□□ 0.16
THBS3-202ENST00000428962 TRDNQ13061 729 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 CCDC152Q4G0S7 254 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 SUSD4Q5VX71 490 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
THBS3-202ENST00000428962 ZKSCAN5Q9Y2L8 839 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
THBS3-202ENST00000428962 IDH1O75874 414 aaKnown RBP16.06■□□□□ 0.16
THBS3-202ENST00000428962 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
THBS3-202ENST00000428962 PHKA1P46020 1223 aa16.06■□□□□ 0.16
THBS3-202ENST00000428962 SEPT12Q8IYM1 358 aa16.06■□□□□ 0.16
THBS3-202ENST00000428962 BICD2Q8TD16 824 aa16.06■□□□□ 0.16
THBS3-202ENST00000428962 TNMDQ9H2S6 317 aa16.06■□□□□ 0.16
THBS3-202ENST00000428962 PIH1D3Q9NQM4 214 aaKnown RBP16.06■□□□□ 0.16
THBS3-202ENST00000428962 ZNF652Q9Y2D9 606 aa16.06■□□□□ 0.16
THBS3-202ENST00000428962 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 PDE6AP16499 860 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 LIG1P18858 919 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
THBS3-202ENST00000428962 CHST3Q7LGC8 479 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 MARCH10Q8NA82 808 aaPredicted RBP16.05■□□□□ 0.16
THBS3-202ENST00000428962 ACSBG1Q96GR2 724 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 NCOA5Q9HCD5 579 aaKnown RBP16.05■□□□□ 0.16
THBS3-202ENST00000428962 ZMYM6O95789 1325 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 GOLGA8BA8MQT2 603 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 UBE2Q2Q8WVN8 375 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 CLSTN2Q9H4D0 955 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 ZNF532Q9HCE3 1301 aa16.05■□□□□ 0.16
THBS3-202ENST00000428962 BCORQ6W2J9 1755 aa16.04■□□□□ 0.16
THBS3-202ENST00000428962 DOCK2Q92608 1830 aa16.04■□□□□ 0.16
THBS3-202ENST00000428962 KLF18A0A0U1RQI7 1052 aa16.04■□□□□ 0.16
THBS3-202ENST00000428962 ZNF500O60304 480 aaPredicted RBP16.04■□□□□ 0.16
THBS3-202ENST00000428962 MAP3K12Q12852 859 aa16.04■□□□□ 0.16
THBS3-202ENST00000428962 SPATA5Q8NB90 893 aa16.04■□□□□ 0.16
THBS3-202ENST00000428962 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms