RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 WASHC4Q2M389 1173 aa15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 GRIPAP1Q4V328 841 aa15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 ZMYM1Q5SVZ6 1142 aa15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 PIH1D3Q9NQM4 214 aaKnown RBP15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 MAP3K12Q12852 859 aa15.31■□□□□ 0.04
HMGB3P4-201ENST00000428776 TTLL6Q8N841 843 aa15.31■□□□□ 0.04
HMGB3P4-201ENST00000428776 TDRD7Q8NHU6 1098 aaKnown RBP15.31■□□□□ 0.04
HMGB3P4-201ENST00000428776 C7orf43Q8WVR3 580 aa15.31■□□□□ 0.04
HMGB3P4-201ENST00000428776 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
HMGB3P4-201ENST00000428776 IQSEC3Q9UPP2 1182 aaPredicted RBP15.31■□□□□ 0.04
HMGB3P4-201ENST00000428776 COL1A1P02452 1464 aaPredicted RBP15.31■□□□□ 0.04
HMGB3P4-201ENST00000428776 IGSF3O75054 1194 aa15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 IDH1O75874 414 aaKnown RBP15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 DPEP1P16444 411 aa15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 KCNA3P22001 575 aa15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 MCCP23508 829 aa15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 UBE3CQ15386 1083 aa15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 SLC9C2Q5TAH2 1124 aa15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 EYA3Q99504 573 aa15.3■□□□□ 0.04
HMGB3P4-201ENST00000428776 CCDC171Q6TFL3 1326 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 A0A0G2JLW4 131 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 IL1R1P14778 569 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 ADD2P35612 726 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 TMED8Q6PL24 325 aaPredicted RBP15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 ILDR2Q71H61 639 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 APPBP2Q92624 585 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 ZC3H12CQ9C0D7 883 aaKnown RBP15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 LRP2BPQ9P2M1 347 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 CD2APQ9Y5K6 639 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 MYH2Q9UKX2 1941 aa15.29■□□□□ 0.04
HMGB3P4-201ENST00000428776 CHGBP05060 677 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 PDE6AP16499 860 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 PTGER2P43116 358 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 ZGPATQ8N5A5 531 aaKnown RBP15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 MAP4K1Q92918 833 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 GPR101Q96P66 508 aaPredicted RBP15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 RTFDC1Q9BY42 306 aaPredicted RBP15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 COA1Q9GZY4 146 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 FER1L6Q2WGJ9 1857 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 PSME4Q14997 1843 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 ARFGEF1Q9Y6D6 1849 aa15.28■□□□□ 0.04
HMGB3P4-201ENST00000428776 SNED1Q8TER0 1413 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 MAST3O60307 1309 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 SALL1Q9NSC2 1324 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 HSPA4P34932 840 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 ANAPC15P60006 121 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 PTH1RQ03431 593 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 SPTY2D1Q68D10 685 aaPredicted RBP15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 ZNF589Q86UQ0 364 aaPredicted RBP15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 SUPT20HQ8NEM7 779 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 OSBP2Q969R2 916 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 PIM2Q9P1W9 311 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 ABCF2Q9UG63 623 aa15.27■□□□□ 0.04
HMGB3P4-201ENST00000428776 ZNF532Q9HCE3 1301 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 TCRBV5S4A2TA0A5A2 114 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 CHAF1AQ13111 956 aaPredicted RBP15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 SOGA3Q5TF21 947 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 ERICH6Q7L0X2 663 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 RTKN2Q8IZC4 609 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 KIF2CQ99661 725 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 RAI14Q9P0K7 980 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 ZNF646O15015 1829 aaPredicted RBP15.26■□□□□ 0.03
HMGB3P4-201ENST00000428776 M0R2C6 588 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 RIMBP2O15034 1052 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 C21orf2O43822 256 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 CCDC93Q567U6 631 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 IL17RAQ96F46 866 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 DSCC1Q9BVC3 393 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 PUS7LQ9H0K6 701 aaKnown RBP15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 SPON1Q9HCB6 807 aa15.25■□□□□ 0.03
HMGB3P4-201ENST00000428776 LAMA4Q16363 1823 aa15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 FAM205AQ6ZU69 1335 aa15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 G3V3G9 751 aa15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 NECTIN1Q15223 517 aa15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 DCAF8Q5TAQ9 597 aa15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 TBC1D22AQ8WUA7 517 aa15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 IPO9Q96P70 1041 aaKnown RBP15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 SCN9AQ15858 1988 aa15.24■□□□□ 0.03
HMGB3P4-201ENST00000428776 RABEP1Q15276 862 aa15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 DALRD3Q5D0E6 543 aaKnown RBP15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 NAA16Q6N069 864 aaPredicted RBP15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 IL27Q8NEV9 243 aa15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 KCNB2Q92953 911 aa15.23■□□□□ 0.03
HMGB3P4-201ENST00000428776 PSMD1Q99460 953 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms