RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 LPXNO60711 386 aa10.15□□□□□ -0.79
CTNND1-208ENST00000428599 GJB2P29033 226 aa10.15□□□□□ -0.79
CTNND1-208ENST00000428599 NAA16Q6N069 864 aaPredicted RBP10.15□□□□□ -0.79
CTNND1-208ENST00000428599 GJC1P36383 396 aa10.14□□□□□ -0.79
CTNND1-208ENST00000428599 BIRC2Q13490 618 aa10.14□□□□□ -0.79
CTNND1-208ENST00000428599 KRT24Q2M2I5 525 aa10.14□□□□□ -0.79
CTNND1-208ENST00000428599 IQSEC3Q9UPP2 1182 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-208ENST00000428599 FAM169AQ9Y6X4 670 aa10.14□□□□□ -0.79
CTNND1-208ENST00000428599 ADGBQ8N7X0 1667 aa10.14□□□□□ -0.79
CTNND1-208ENST00000428599 ATP2B3Q16720 1220 aa10.14□□□□□ -0.79
CTNND1-208ENST00000428599 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-208ENST00000428599 RRP36Q96EU6 259 aaKnown RBP10.14□□□□□ -0.79
CTNND1-208ENST00000428599 PAIP2Q9BPZ3 127 aaKnown RBP10.14□□□□□ -0.79
CTNND1-208ENST00000428599 ZC3H12CQ9C0D7 883 aaKnown RBP10.14□□□□□ -0.79
CTNND1-208ENST00000428599 SLAIN2Q9P270 581 aa10.14□□□□□ -0.79
CTNND1-208ENST00000428599 ATP2A2P16615 1042 aaKnown RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 RBM25P49756 843 aaKnown RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 CBX1P83916 185 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 CCDC50Q8IVM0 306 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 SMC6Q96SB8 1091 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 SH2D4AQ9H788 454 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 PODXL2Q9NZ53 605 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 CHD1O14646 1710 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 SBNO1A3KN83 1393 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 POLR3GO15318 223 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 ZBTB24O43167 697 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 ZBTB43O43298 467 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 RTN1Q16799 776 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 PRPF31Q8WWY3 499 aaKnown RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 LTKP29376 864 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 SLC8A3P57103 927 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 TPTE2Q6XPS3 522 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 TSPYL6Q8N831 410 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 SMC1BQ8NDV3 1235 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 PLCB3Q01970 1234 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 SPAG1Q07617 926 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 TPD52P55327 224 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
CTNND1-208ENST00000428599 CDCA7Q9BWT1 371 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 TRMT1Q9NXH9 659 aaKnown RBP10.13□□□□□ -0.79
CTNND1-208ENST00000428599 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 ZSCAN30Q86W11 494 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 ZSCAN16Q9H4T2 348 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 BACH1O14867 736 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 GMNNO75496 209 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 IGHDP01880 384 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 ASIC1P78348 528 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 CWF19L2Q2TBE0 894 aaKnown RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 LINS1Q8NG48 757 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 TTC14Q96N46 770 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 WWC3Q9ULE0 1092 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 PSMA7O14818 248 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 GNPATO15228 680 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 CAVIN2O95810 425 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 CCDC6Q16204 474 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 TTC22Q5TAA0 569 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 DAAM2Q86T65 1068 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 GTPBP4Q9BZE4 634 aaKnown RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 GPHNQ9NQX3 736 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 ABCA8O94911 1581 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 KLF18A0A0U1RQI7 1052 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 KRT79Q5XKE5 535 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 HS2ST1Q7LGA3 356 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 CCT6BQ92526 530 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 HAUS7Q99871 368 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 MAK16Q9BXY0 300 aaKnown RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 ARHGEF5Q12774 1597 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 ARHGEF10O15013 1369 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 RTL9Q8NET4 1388 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 MAGEB6P1A0A0J9YX57 407 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 IL15P40933 162 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 SYKP43405 635 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 RAB11FIP4Q86YS3 637 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 PKNOX2Q96KN3 472 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 MKRN1Q9UHC7 482 aaKnown RBP10.12□□□□□ -0.79
CTNND1-208ENST00000428599 BRPF3Q9ULD4 1205 aa10.12□□□□□ -0.79
CTNND1-208ENST00000428599 ESPNB1AK53 854 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 IRS4O14654 1257 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-208ENST00000428599 SNW1Q13573 536 aaKnown RBP10.11□□□□□ -0.79
CTNND1-208ENST00000428599 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 NAP1L4Q99733 375 aaKnown RBP10.11□□□□□ -0.79
CTNND1-208ENST00000428599 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
CTNND1-208ENST00000428599 TMOD4Q9NZQ9 345 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 TMEM110-MUSTN1A8MSY1 372 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 FAM98CQ17RN3 349 aaKnown RBP10.11□□□□□ -0.79
CTNND1-208ENST00000428599 BMP2KLQ5H9B9 411 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 PA2G4Q9UQ80 394 aaKnown RBP10.11□□□□□ -0.79
CTNND1-208ENST00000428599 GNAT2P19087 354 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 AFMP43652 599 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 ATP8B2P98198 1209 aa10.11□□□□□ -0.79
CTNND1-208ENST00000428599 TNPO1Q92973 898 aaKnown RBP10.11□□□□□ -0.79
CTNND1-208ENST00000428599 VAMP4O75379 141 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 ALDH3A1P30838 453 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 ALG1Q9BT22 464 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 ANKRD2Q9GZV1 360 aa10.1□□□□□ -0.79
CTNND1-208ENST00000428599 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms