RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 RRP36Q96EU6 259 aaKnown RBP11.13□□□□□ -0.63
SNX13-203ENST00000428135 SYNCQ9H7C4 482 aa11.13□□□□□ -0.63
SNX13-203ENST00000428135 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
SNX13-203ENST00000428135 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
SNX13-203ENST00000428135 ASIC1P78348 528 aa11.13□□□□□ -0.63
SNX13-203ENST00000428135 CETN1Q12798 172 aa11.13□□□□□ -0.63
SNX13-203ENST00000428135 PTPN14Q15678 1187 aa11.13□□□□□ -0.63
SNX13-203ENST00000428135 DPP8Q6V1X1 898 aaPredicted RBP11.13□□□□□ -0.63
SNX13-203ENST00000428135 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
SNX13-203ENST00000428135 ROBO2Q9HCK4 1378 aa11.13□□□□□ -0.63
SNX13-203ENST00000428135 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 CFAP74Q9C0B2 1584 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 BACH1O14867 736 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 HIBADHP31937 336 aaKnown RBP11.12□□□□□ -0.63
SNX13-203ENST00000428135 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
SNX13-203ENST00000428135 YEATS4O95619 227 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 ANKRD2Q9GZV1 360 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 GGA1Q9UJY5 639 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 COMMD10Q9Y6G5 202 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 SAMD9LQ8IVG5 1584 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 RIMBP3CA6NJZ7 1639 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 RIMBP3BA6NNM3 1639 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 STX17P56962 302 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 ZNF830Q96NB3 372 aaPredicted RBP11.12□□□□□ -0.63
SNX13-203ENST00000428135 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 RIMBP3Q9UFD9 1639 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 MRVI1Q9Y6F6 885 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 MAEAQ7L5Y9 396 aa11.12□□□□□ -0.63
SNX13-203ENST00000428135 N4BP3O15049 544 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 ZNF496Q96IT1 587 aaPredicted RBP11.11□□□□□ -0.63
SNX13-203ENST00000428135 MAPKBP1O60336 1514 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 ERICH4A6NGS2 130 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 TMEM110-MUSTN1A8MSY1 372 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 DDX39AO00148 427 aaKnown RBP11.11□□□□□ -0.63
SNX13-203ENST00000428135 ERLIN1O75477 346 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 CREB3L3Q68CJ9 461 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 UBXN4Q92575 508 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 DDX21Q9NR30 783 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNX13-203ENST00000428135 SORBS3O60504 671 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 STX1AQ16623 288 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 ERMNQ8TAM6 284 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 SLC52A2Q9HAB3 445 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 ASAP1Q9ULH1 1129 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
SNX13-203ENST00000428135 ZNF165P49910 485 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 IQCEQ6IPM2 695 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 CPXCR1Q8N123 301 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
SNX13-203ENST00000428135 ZRSR2Q15696 482 aaKnown RBP11.11□□□□□ -0.63
SNX13-203ENST00000428135 SH3TC1Q8TE82 1336 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 hCG_1642624A0A1W2PR95 340 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 DYDC1Q8WWB3 177 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 XAGE2Q96GT9 111 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 PICK1Q9NRD5 415 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 ADCY5O95622 1261 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 AK2P54819 239 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 HDAC1Q13547 482 aaPredicted RBP11.1□□□□□ -0.63
SNX13-203ENST00000428135 MYL10Q9BUA6 226 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 USH1GQ495M9 461 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 STXBP4Q6ZWJ1 553 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 HLTFQ14527 1009 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNX13-203ENST00000428135 USP48Q86UV5 1035 aa11.1□□□□□ -0.63
SNX13-203ENST00000428135 DDX19AQ9NUU7 478 aaKnown RBP11.1□□□□□ -0.63
SNX13-203ENST00000428135 UBE4AQ14139 1066 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 ZNF174Q15697 407 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 SUCLG2Q96I99 432 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 USO1O60763 962 aaKnown RBP11.09□□□□□ -0.63
SNX13-203ENST00000428135 MYCLP12524 364 aaPredicted RBP11.09□□□□□ -0.63
SNX13-203ENST00000428135 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 GPIHBP1Q8IV16 184 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 USP19O94966 1318 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 ZBTB7AO95365 584 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 IL13P35225 146 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 IFFO1Q0D2I5 559 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 TMTC2Q8N394 836 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 METTL22Q9BUU2 404 aaPredicted RBP11.09□□□□□ -0.63
SNX13-203ENST00000428135 ESPNB1AK53 854 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 UNC5CLQ8IV45 518 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 CTAGE5O15320 804 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 PARP1P09874 1014 aaKnown RBP11.09□□□□□ -0.63
SNX13-203ENST00000428135 ERCC3P19447 782 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 KRT2P35908 639 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
SNX13-203ENST00000428135 PDE8AO60658 829 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 ANO6Q4KMQ2 910 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 ZSCAN12O43309 604 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 DENND2AQ9ULE3 1009 aa11.08□□□□□ -0.64
SNX13-203ENST00000428135 FAM13AO94988 1023 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms