RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 PPP2R3BQ9Y5P8 575 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
RDH11-202ENST00000428130 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
RDH11-202ENST00000428130 DLGAP5Q15398 846 aa13.29□□□□□ -0.28
RDH11-202ENST00000428130 PCDHAC2Q9Y5I4 1007 aa13.29□□□□□ -0.28
RDH11-202ENST00000428130 IGKV5-2P06315 115 aa13.28□□□□□ -0.28
RDH11-202ENST00000428130 CERS5Q8N5B7 392 aa13.28□□□□□ -0.28
RDH11-202ENST00000428130 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
RDH11-202ENST00000428130 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
RDH11-202ENST00000428130 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
RDH11-202ENST00000428130 USP2O75604 605 aaPredicted RBP13.27□□□□□ -0.29
RDH11-202ENST00000428130 DDX58O95786 925 aaKnown RBP13.27□□□□□ -0.29
RDH11-202ENST00000428130 IREB2P48200 963 aaKnown RBP13.27□□□□□ -0.29
RDH11-202ENST00000428130 SUPT20HL1Q3ZLR7 823 aa13.27□□□□□ -0.29
RDH11-202ENST00000428130 SLC9C1Q4G0N8 1177 aa13.27□□□□□ -0.29
RDH11-202ENST00000428130 NBPF12Q5TAG4 269 aaPredicted RBP13.27□□□□□ -0.29
RDH11-202ENST00000428130 ANKRD13AQ8IZ07 590 aa13.27□□□□□ -0.29
RDH11-202ENST00000428130 CD209Q9NNX6 404 aa13.27□□□□□ -0.29
RDH11-202ENST00000428130 PTCH2Q9Y6C5 1203 aa13.27□□□□□ -0.29
RDH11-202ENST00000428130 AOX1Q06278 1338 aa13.27□□□□□ -0.29
RDH11-202ENST00000428130 A0A0C4DFX4 3053 aa13.27□□□□□ -0.29
RDH11-202ENST00000428130 CLRN2A0PK11 232 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 H0YGN5 161 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
RDH11-202ENST00000428130 RALBP1Q15311 655 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 IRS2Q9Y4H2 1338 aa13.26□□□□□ -0.29
RDH11-202ENST00000428130 MYO1BO43795 1136 aa13.25□□□□□ -0.29
RDH11-202ENST00000428130 CFAP100Q494V2 611 aa13.25□□□□□ -0.29
RDH11-202ENST00000428130 OPTNQ96CV9 577 aa13.25□□□□□ -0.29
RDH11-202ENST00000428130 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
RDH11-202ENST00000428130 PRMT6Q96LA8 375 aaPredicted RBP13.25□□□□□ -0.29
RDH11-202ENST00000428130 ELP3Q9H9T3 547 aa13.25□□□□□ -0.29
RDH11-202ENST00000428130 VEZTQ9HBM0 779 aa13.25□□□□□ -0.29
RDH11-202ENST00000428130 CACNA1FO60840 1977 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 PI4KAP2A4QPH2 592 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
RDH11-202ENST00000428130 ITGA6P23229 1130 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 CHRNDQ07001 517 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
RDH11-202ENST00000428130 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 KSR2Q6VAB6 950 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 PI4KAP1Q8N8J0 262 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 C8orf58Q8NAV2 365 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 IFT57Q9NWB7 429 aa13.24□□□□□ -0.29
RDH11-202ENST00000428130 LAMA3Q16787 3333 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 H7C1W4 665 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 SNAP23O00161 211 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 KCNJ4P48050 445 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 GNAI1P63096 354 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 RASA3Q14644 834 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 TAF1CQ15572 869 aaPredicted RBP13.23□□□□□ -0.29
RDH11-202ENST00000428130 CCDC30Q5VVM6 783 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 UBE3BQ7Z3V4 1068 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 BRI3BPQ8WY22 251 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 MPHOSPH8Q99549 860 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 PLA2G12BQ9BX93 195 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 ADAMTS8Q9UP79 889 aa13.23□□□□□ -0.29
RDH11-202ENST00000428130 MYBBP1AQ9BQG0 1328 aaKnown RBP13.22□□□□□ -0.29
RDH11-202ENST00000428130 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
RDH11-202ENST00000428130 IL1R1P14778 569 aa13.22□□□□□ -0.29
RDH11-202ENST00000428130 FKBP1AP62942 108 aaKnown RBP13.22□□□□□ -0.29
RDH11-202ENST00000428130 NEXNQ0ZGT2 675 aa13.22□□□□□ -0.29
RDH11-202ENST00000428130 WDR43Q15061 677 aaKnown RBP eCLIP13.22□□□□□ -0.29
RDH11-202ENST00000428130 C15orf52Q6ZUT6 534 aaKnown RBP13.22□□□□□ -0.29
RDH11-202ENST00000428130 SH3TC2Q8TF17 1288 aa13.22□□□□□ -0.29
RDH11-202ENST00000428130 ZFYVE28Q9HCC9 887 aa13.22□□□□□ -0.29
RDH11-202ENST00000428130 MGAMO43451 1857 aa13.22□□□□□ -0.29
RDH11-202ENST00000428130 CCL15-CCL14A0A0B4J2E2 113 aa13.21□□□□□ -0.29
RDH11-202ENST00000428130 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
RDH11-202ENST00000428130 CSF1RP07333 972 aa13.21□□□□□ -0.29
RDH11-202ENST00000428130 CCL15Q16663 113 aa13.21□□□□□ -0.29
RDH11-202ENST00000428130 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.21□□□□□ -0.29
RDH11-202ENST00000428130 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
RDH11-202ENST00000428130 FAM43AQ8N2R8 423 aa13.21□□□□□ -0.29
RDH11-202ENST00000428130 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
RDH11-202ENST00000428130 TAF5LO75529 589 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 GTF2A2P52657 109 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
RDH11-202ENST00000428130 CASP7P55210 303 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 ZNF804AQ7Z570 1209 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 TEPSINQ96N21 525 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 JAG2Q9Y219 1238 aa13.2□□□□□ -0.3
RDH11-202ENST00000428130 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
RDH11-202ENST00000428130 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
RDH11-202ENST00000428130 VGLL4Q14135 290 aa13.19□□□□□ -0.3
RDH11-202ENST00000428130 GCKRQ14397 625 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms