RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SCRN1Q12765 414 aa16.56■□□□□ 0.24
APOBEC3D-202ENST00000427494 CSPP1Q1MSJ5 1256 aa16.56■□□□□ 0.24
APOBEC3D-202ENST00000427494 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
APOBEC3D-202ENST00000427494 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
APOBEC3D-202ENST00000427494 SNAP23O00161 211 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 AGXT2Q9BYV1 514 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 USP21Q9UK80 565 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 THSD7AQ9UPZ6 1657 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 DOCK2Q92608 1830 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 UBE2HP62256 183 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 FERMT3Q86UX7 667 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 NHSQ6T4R5 1651 aa16.55■□□□□ 0.24
APOBEC3D-202ENST00000427494 ZNF532Q9HCE3 1301 aa16.54■□□□□ 0.24
APOBEC3D-202ENST00000427494 PDE6AP16499 860 aa16.54■□□□□ 0.24
APOBEC3D-202ENST00000427494 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
APOBEC3D-202ENST00000427494 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
APOBEC3D-202ENST00000427494 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
APOBEC3D-202ENST00000427494 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
APOBEC3D-202ENST00000427494 COL4A1P02462 1669 aa16.54■□□□□ 0.24
APOBEC3D-202ENST00000427494 RASGRF1Q13972 1273 aa16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 RBSNQ9H1K0 784 aa16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 PHF14O94880 888 aa16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 CHRNDQ07001 517 aa16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
APOBEC3D-202ENST00000427494 SPATA31A6Q5VVP1 1343 aa16.52■□□□□ 0.24
APOBEC3D-202ENST00000427494 A0A1B0GUL6 1792 aa16.52■□□□□ 0.24
APOBEC3D-202ENST00000427494 ZNF213O14771 459 aa16.52■□□□□ 0.24
APOBEC3D-202ENST00000427494 KRT85P78386 507 aa16.52■□□□□ 0.24
APOBEC3D-202ENST00000427494 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
APOBEC3D-202ENST00000427494 FAM184AQ8NB25 1140 aa16.52■□□□□ 0.24
APOBEC3D-202ENST00000427494 SMARCC2Q8TAQ2 1214 aa16.52■□□□□ 0.24
APOBEC3D-202ENST00000427494 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 CCT2P78371 535 aaKnown RBP16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 NSUN7Q8NE18 718 aaKnown RBP16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 H3BQV1 296 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 APPP05067 770 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 MCM5P33992 734 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 BCAMP50895 628 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 C3orf67Q6ZVT6 689 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 RALYLQ86SE5 291 aaKnown RBP16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 FBXL16Q8N461 479 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 NCOA7Q8NI08 942 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 ANP32BQ92688 251 aaKnown RBP16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 TAF1P21675 1872 aa16.51■□□□□ 0.23
APOBEC3D-202ENST00000427494 PTPDC1A2A3K4 754 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 PRC1O43663 620 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 PDIA3P30101 505 aaKnown RBP16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 FAM182BQ5T319 152 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 CCDC183Q5T5S1 534 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 FAM173BQ6P4H8 233 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 FAM43AQ8N2R8 423 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 MAGEB6Q8N7X4 407 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 AIDAQ96BJ3 306 aa16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 NCOA5Q9HCD5 579 aaKnown RBP16.5■□□□□ 0.23
APOBEC3D-202ENST00000427494 RGL2O15211 777 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 CTDNEP1O95476 244 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 TSPY26PQ9H489 355 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 GNPATO15228 680 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 CCDC173Q0VFZ6 552 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 SF3B3Q15393 1217 aaKnown RBP16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 GPHNQ9NQX3 736 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 CCNL1Q9UK58 526 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 COL24A1Q17RW2 1714 aa16.49■□□□□ 0.23
APOBEC3D-202ENST00000427494 ANTXR2P58335 489 aa16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 NBPF3Q9H094 633 aa16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 TAF1LQ8IZX4 1826 aa16.48■□□□□ 0.23
APOBEC3D-202ENST00000427494 MBD4O95243 580 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 FOSBP53539 338 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 EVCP57679 992 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 TRDNQ13061 729 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 RESTQ13127 1097 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 MYH15Q9Y2K3 1946 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 LY75O60449 1722 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 ZPR1O75312 459 aa16.47■□□□□ 0.23
APOBEC3D-202ENST00000427494 TBC1D10CQ8IV04 446 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms