RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CHADLQ6NUI6 762 aa31.04■■■□□ 2.56
HERPUD2-205ENST00000427455 TRPM4Q8TD43 1214 aa31.04■■■□□ 2.56
HERPUD2-205ENST00000427455 GPR108Q9NPR9 543 aa31.04■■■□□ 2.56
HERPUD2-205ENST00000427455 IQSEC3Q9UPP2 1182 aaPredicted RBP31.04■■■□□ 2.56
HERPUD2-205ENST00000427455 EXOC6BQ9Y2D4 811 aa31.04■■■□□ 2.56
HERPUD2-205ENST00000427455 SUPT16HQ9Y5B9 1047 aaKnown RBP31.04■■■□□ 2.56
HERPUD2-205ENST00000427455 ADORA1P30542 326 aa31.03■■■□□ 2.56
HERPUD2-205ENST00000427455 TIMM10P62072 90 aa31.03■■■□□ 2.56
HERPUD2-205ENST00000427455 ERC1Q8IUD2 1116 aa31.03■■■□□ 2.56
HERPUD2-205ENST00000427455 JAG2Q9Y219 1238 aa31.03■■■□□ 2.56
HERPUD2-205ENST00000427455 CLEC11AQ9Y240 323 aa31.03■■■□□ 2.56
HERPUD2-205ENST00000427455 CERS5Q8N5B7 392 aa31.02■■■□□ 2.56
HERPUD2-205ENST00000427455 GNL3LQ9NVN8 582 aaKnown RBP31.02■■■□□ 2.56
HERPUD2-205ENST00000427455 MMP14P50281 582 aa31.01■■■□□ 2.55
HERPUD2-205ENST00000427455 SAMD7Q7Z3H4 446 aa31.01■■■□□ 2.55
HERPUD2-205ENST00000427455 OGFOD1Q8N543 542 aa31.01■■■□□ 2.55
HERPUD2-205ENST00000427455 XAGE2Q96GT9 111 aa31.01■■■□□ 2.55
HERPUD2-205ENST00000427455 NEUROD6Q96NK8 337 aa31.01■■■□□ 2.55
HERPUD2-205ENST00000427455 PHKA1P46020 1223 aa31■■■□□ 2.55
HERPUD2-205ENST00000427455 KIF4BQ2VIQ3 1234 aa31■■■□□ 2.55
HERPUD2-205ENST00000427455 TBC1D10BQ4KMP7 808 aaPredicted RBP31■■■□□ 2.55
HERPUD2-205ENST00000427455 TNNI3KQ59H18 835 aa31■■■□□ 2.55
HERPUD2-205ENST00000427455 MFSD14BQ5SR56 506 aa31■■■□□ 2.55
HERPUD2-205ENST00000427455 KIAA0825Q8IV33 1275 aa31■■■□□ 2.55
HERPUD2-205ENST00000427455 FPGT-TNNI3KV9GXZ4 949 aa31■■■□□ 2.55
HERPUD2-205ENST00000427455 CHAF1AQ13111 956 aaPredicted RBP30.99■■■□□ 2.55
HERPUD2-205ENST00000427455 CCDC102BQ68D86 513 aa30.99■■■□□ 2.55
HERPUD2-205ENST00000427455 COL1A1P02452 1464 aaPredicted RBP30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 SEMA3EO15041 775 aa30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 ZBTB22O15209 634 aa30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 EGFRP00533 1210 aa30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 HIRAP54198 1017 aaPredicted RBP30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 TBC1D22AQ8WUA7 517 aa30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 MYOZ2Q9NPC6 264 aa30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 HDAC9Q9UKV0 1011 aa30.98■■■□□ 2.55
HERPUD2-205ENST00000427455 ZC3H15Q8WU90 426 aaKnown RBP30.97■■■□□ 2.55
HERPUD2-205ENST00000427455 GORABQ5T7V8 394 aa30.96■■■□□ 2.55
HERPUD2-205ENST00000427455 RBM26Q5T8P6 1007 aaKnown RBP30.96■■■□□ 2.55
HERPUD2-205ENST00000427455 RAB11FIP3O75154 756 aa30.95■■■□□ 2.55
HERPUD2-205ENST00000427455 AAMPQ13685 434 aa30.95■■■□□ 2.55
HERPUD2-205ENST00000427455 RHPN1Q8TCX5 695 aa30.95■■■□□ 2.55
HERPUD2-205ENST00000427455 DENND2AQ9ULE3 1009 aa30.95■■■□□ 2.55
HERPUD2-205ENST00000427455 MAP1SQ66K74 1059 aaPredicted RBP30.94■■■□□ 2.54
HERPUD2-205ENST00000427455 WDR66Q8TBY9 1149 aa30.94■■■□□ 2.54
HERPUD2-205ENST00000427455 KIF1BPQ96EK5 621 aa30.94■■■□□ 2.54
HERPUD2-205ENST00000427455 PGAP2Q9UHJ9 254 aa30.94■■■□□ 2.54
HERPUD2-205ENST00000427455 PCDHB15Q9Y5E8 787 aa30.94■■■□□ 2.54
HERPUD2-205ENST00000427455 PDS5AQ29RF7 1337 aaKnown RBP30.93■■■□□ 2.54
HERPUD2-205ENST00000427455 F8W031 263 aaPredicted RBP30.92■■■□□ 2.54
HERPUD2-205ENST00000427455 CNTROBQ8N137 903 aa30.92■■■□□ 2.54
HERPUD2-205ENST00000427455 RASGRF1Q13972 1273 aa30.91■■■□□ 2.54
HERPUD2-205ENST00000427455 EAF2Q96CJ1 260 aaPredicted RBP30.91■■■□□ 2.54
HERPUD2-205ENST00000427455 DBNDD2Q9BQY9 259 aa30.91■■■□□ 2.54
HERPUD2-205ENST00000427455 SUGT1Q9Y2Z0 365 aa30.91■■■□□ 2.54
HERPUD2-205ENST00000427455 APBB1O00213 710 aa30.9■■■□□ 2.54
HERPUD2-205ENST00000427455 TTF2Q9UNY4 1162 aaKnown RBP30.9■■■□□ 2.54
HERPUD2-205ENST00000427455 ITGBL1O95965 494 aaPredicted RBP30.89■■■□□ 2.54
HERPUD2-205ENST00000427455 HSPA6P17066 643 aa30.89■■■□□ 2.54
HERPUD2-205ENST00000427455 ARID4AP29374 1257 aaPredicted RBP30.89■■■□□ 2.54
HERPUD2-205ENST00000427455 IL1RAPL2Q9NP60 686 aa30.89■■■□□ 2.54
HERPUD2-205ENST00000427455 DBNLQ9UJU6 430 aaKnown RBP30.89■■■□□ 2.54
HERPUD2-205ENST00000427455 SALL1Q9NSC2 1324 aa30.89■■■□□ 2.54
HERPUD2-205ENST00000427455 UQCRFS1P1P0C7P4 283 aa30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 SCARF1Q14162 830 aa30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 CCDC158Q5M9N0 1113 aa30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 AACSQ86V21 672 aa30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 CLASRPQ8N2M8 674 aaKnown RBP30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 MTMR14Q8NCE2 650 aa30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 CCDC8Q9H0W5 538 aaPredicted RBP30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 GGA3Q9NZ52 723 aa30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 PASKQ96RG2 1323 aa30.88■■■□□ 2.53
HERPUD2-205ENST00000427455 WNT10BO00744 389 aa30.87■■■□□ 2.53
HERPUD2-205ENST00000427455 GRIK5Q16478 980 aa30.87■■■□□ 2.53
HERPUD2-205ENST00000427455 EXOC6Q8TAG9 804 aa30.87■■■□□ 2.53
HERPUD2-205ENST00000427455 DCTPP1Q9H773 170 aa30.87■■■□□ 2.53
HERPUD2-205ENST00000427455 TLR7Q9NYK1 1049 aaKnown RBP30.87■■■□□ 2.53
HERPUD2-205ENST00000427455 SERPINA10Q9UK55 444 aa30.87■■■□□ 2.53
HERPUD2-205ENST00000427455 DLGAP5Q15398 846 aa30.86■■■□□ 2.53
HERPUD2-205ENST00000427455 NBPF9Q3BBW0 867 aa30.86■■■□□ 2.53
HERPUD2-205ENST00000427455 TTC39AQ5SRH9 613 aa30.86■■■□□ 2.53
HERPUD2-205ENST00000427455 DCPSQ96C86 337 aaKnown RBP30.86■■■□□ 2.53
HERPUD2-205ENST00000427455 ZBED3Q96IU2 234 aaPredicted RBP30.86■■■□□ 2.53
HERPUD2-205ENST00000427455 MAST3O60307 1309 aa30.86■■■□□ 2.53
HERPUD2-205ENST00000427455 ASTN2O75129 1339 aaPredicted RBP30.85■■■□□ 2.53
HERPUD2-205ENST00000427455 CFAP100Q494V2 611 aa30.85■■■□□ 2.53
HERPUD2-205ENST00000427455 ZGPATQ8N5A5 531 aaKnown RBP30.85■■■□□ 2.53
HERPUD2-205ENST00000427455 LRRCC1Q9C099 1032 aa30.85■■■□□ 2.53
HERPUD2-205ENST00000427455 ECM29Q5VYK3 1845 aa30.84■■■□□ 2.53
HERPUD2-205ENST00000427455 PITPNM2Q9BZ72 1349 aa30.84■■■□□ 2.53
HERPUD2-205ENST00000427455 ANGEL2Q5VTE6 544 aaKnown RBP30.84■■■□□ 2.53
HERPUD2-205ENST00000427455 CDC37L1Q7L3B6 337 aa30.84■■■□□ 2.53
HERPUD2-205ENST00000427455 SPATA5Q8NB90 893 aa30.84■■■□□ 2.53
HERPUD2-205ENST00000427455 ZNF512BQ96KM6 892 aaPredicted RBP30.84■■■□□ 2.53
HERPUD2-205ENST00000427455 HMG20BQ9P0W2 317 aa30.84■■■□□ 2.53
HERPUD2-205ENST00000427455 MCAMP43121 646 aa30.83■■■□□ 2.53
HERPUD2-205ENST00000427455 APLP1P51693 650 aa30.83■■■□□ 2.53
HERPUD2-205ENST00000427455 HDLBPQ00341 1268 aaKnown RBP30.83■■■□□ 2.53
HERPUD2-205ENST00000427455 GLIS2Q9BZE0 524 aaPredicted RBP30.83■■■□□ 2.53
HERPUD2-205ENST00000427455 SPDYE2BA6NHP3 402 aa30.82■■■□□ 2.52
HERPUD2-205ENST00000427455 SPDYE6P0CI01 402 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms