RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ZNF622Q969S3 477 aaKnown RBP eCLIP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 NLRP3Q96P20 1036 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 PLA2G12BQ9BX93 195 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 BICC1Q9H694 974 aaKnown RBP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 GREM2Q9H772 168 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 N4BP2Q86UW6 1770 aaPredicted RBP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 GNAI3P08754 354 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 MS4A1P11836 297 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 NPR1P16066 1061 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 FAM161AQ3B820 660 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 STYK1Q6J9G0 422 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 EXOC6Q8TAG9 804 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 CELF1Q92879 486 aaKnown RBP7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 MASTLQ96GX5 879 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 TMUB1Q9BVT8 246 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 PDZRN3Q9UPQ7 1066 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 KIF13BQ9NQT8 1826 aa7.17□□□□□ -1.26
HERPUD2-204ENST00000426180 GNAI2P04899 355 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 CENPBP07199 599 aaPredicted RBP7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 YBX3P16989 372 aaKnown RBP eCLIP7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 ITGA6P23229 1130 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 RFX5P48382 616 aaPredicted RBP7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 RABL6Q3YEC7 729 aaPredicted RBP7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 CCDC152Q4G0S7 254 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 KLHDC4Q8TBB5 520 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 RPGRQ92834 1020 aaKnown RBP7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 RBM17Q96I25 401 aaKnown RBP7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 ZNF594Q96JF6 807 aaPredicted RBP7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 CRAMP1Q96RY5 1269 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 ZBTB40Q9NUA8 1239 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 DDX19BQ9UMR2 479 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 CHMP3Q9Y3E7 222 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 SRCAPQ6ZRS2 3230 aa7.16□□□□□ -1.26
HERPUD2-204ENST00000426180 LAMB2P55268 1798 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 PNMA6EA0A0J9YXQ4 647 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 C21orf2O43822 256 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 GRAPQ13588 217 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 DALRD3Q5D0E6 543 aaKnown RBP7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 PRPF40BQ6NWY9 871 aaKnown RBP7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 DDX46Q7L014 1031 aaKnown RBP7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 SIRT2Q8IXJ6 389 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 TTLL6Q8N841 843 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 GRAPLQ8TC17 118 aaPredicted RBP7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 C7orf43Q8WVR3 580 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 CNKSR1Q969H4 720 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 PRR14Q9BWN1 585 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 PUS3Q9BZE2 481 aaKnown RBP7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 PIM2Q9P1W9 311 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 BCS1LQ9Y276 419 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 RTL9Q8NET4 1388 aa7.15□□□□□ -1.26
HERPUD2-204ENST00000426180 ANKRD18BA2A2Z9 1011 aa7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 WTIPA6NIX2 430 aaPredicted RBP7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 PPEF1O14829 653 aaPredicted RBP7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 HSP90B1P14625 803 aaKnown RBP7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 RPS8P62241 208 aaKnown RBP7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 ATP8B2P98198 1209 aa7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 LRRC24Q50LG9 513 aa7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 CEP85Q6P2H3 762 aa7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 PA2G4Q9UQ80 394 aaKnown RBP7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 PCDHB3Q9Y5E6 796 aa7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 PCDHB15Q9Y5E8 787 aa7.14□□□□□ -1.27
HERPUD2-204ENST00000426180 DLEC1Q9Y238 1755 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 SRGAP3O43295 1099 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 ALDH1B1P30837 517 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 PRELPP51888 382 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 GPSM2P81274 684 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 PTPN12Q05209 780 aaKnown RBP7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 IFIT5Q13325 482 aaKnown RBP7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 MTX1Q13505 466 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 CCDC57Q2TAC2 916 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 ZNF787Q6DD87 383 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 ANKRD18AQ8IVF6 992 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 ATP6V0A2Q9Y487 856 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 TAF1P21675 1872 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 SLX4Q8IY92 1834 aa7.13□□□□□ -1.27
HERPUD2-204ENST00000426180 SNED1Q8TER0 1413 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 SNAP23O00161 211 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 BBOX1O75936 387 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 GPR162Q16538 588 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 ATG9AQ7Z3C6 839 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 SP8Q8IXZ3 490 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 HELBQ8NG08 1087 aaPredicted RBP7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 SSH3Q8TE77 659 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 GPR101Q96P66 508 aaPredicted RBP7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 CDC5LQ99459 802 aaKnown RBP7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 SIL1Q9H173 461 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 BSDC1Q9NW68 430 aaPredicted RBP7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 MINPP1Q9UNW1 487 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 HDAC5Q9UQL6 1122 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 RIPOR2Q9Y4F9 1068 aa7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.12□□□□□ -1.27
HERPUD2-204ENST00000426180 EYA2O00167 538 aa7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 NFKBIEO00221 500 aa7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 TAF5LO75529 589 aa7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 IGHMBP2P38935 993 aaKnown RBP7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 RASSF7Q02833 373 aa7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 CHRNDQ07001 517 aa7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 TAF7LQ5H9L4 462 aa7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 LDHAL6AQ6ZMR3 332 aa7.11□□□□□ -1.27
HERPUD2-204ENST00000426180 ARHGAP27Q6ZUM4 889 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms