RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 FSCN2O14926 492 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 EPHA1P21709 976 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 MFAP1P55081 439 aaKnown RBP6.76□□□□□ -1.33
HDAC9-209ENST00000425071 GRM2Q14416 872 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 SETDB1Q15047 1291 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 DDX54Q8TDD1 881 aaKnown RBP6.76□□□□□ -1.33
HDAC9-209ENST00000425071 LENG1Q96BZ8 264 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-209ENST00000425071 HHIPQ96QV1 700 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 BCO2Q9BYV7 579 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 CLEC4MQ9H2X3 399 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-209ENST00000425071 SEC31BQ9NQW1 1179 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 SH2B1Q9NRF2 756 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-209ENST00000425071 DLL1O00548 723 aa6.75□□□□□ -1.33
HDAC9-209ENST00000425071 DEAF1O75398 565 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-209ENST00000425071 GRIA4P48058 902 aa6.75□□□□□ -1.33
HDAC9-209ENST00000425071 IKBKEQ14164 716 aa6.75□□□□□ -1.33
HDAC9-209ENST00000425071 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
HDAC9-209ENST00000425071 FBXO33Q7Z6M2 555 aa6.75□□□□□ -1.33
HDAC9-209ENST00000425071 GLIS3Q8NEA6 775 aa6.75□□□□□ -1.33
HDAC9-209ENST00000425071 ABCB6Q9NP58 842 aa6.75□□□□□ -1.33
HDAC9-209ENST00000425071 GNA15P30679 374 aa6.74□□□□□ -1.33
HDAC9-209ENST00000425071 GSTT1P30711 240 aa6.74□□□□□ -1.33
HDAC9-209ENST00000425071 C19orf57Q0VDD7 668 aa6.74□□□□□ -1.33
HDAC9-209ENST00000425071 SUZ12Q15022 739 aaKnown RBP6.74□□□□□ -1.33
HDAC9-209ENST00000425071 ADAMTSL4Q6UY14 1074 aa6.74□□□□□ -1.33
HDAC9-209ENST00000425071 ANKRD24Q8TF21 1146 aa6.74□□□□□ -1.33
HDAC9-209ENST00000425071 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
HDAC9-209ENST00000425071 KRBA1A5PL33 1030 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 IGHA1P01876 353 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 ESRRAP11474 423 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-209ENST00000425071 CD68P34810 354 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-209ENST00000425071 PCDH1Q08174 1060 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 SPRED3Q2MJR0 410 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
HDAC9-209ENST00000425071 DTHD1Q6ZMT9 781 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 TMEM130Q8N3G9 435 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 ZNF576Q9H609 170 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 FAM8A1Q9UBU6 413 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
HDAC9-209ENST00000425071 METTL12A8MUP2 240 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 SOX1O00570 391 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-209ENST00000425071 GRIK4Q16099 956 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 NXPE4Q6UWF7 544 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 PI16Q6UXB8 463 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 C12orf49Q9H741 205 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 PPM1HQ9ULR3 514 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 AK5Q9Y6K8 562 aa6.72□□□□□ -1.33
HDAC9-209ENST00000425071 TM4SF5O14894 197 aa6.71□□□□□ -1.34
HDAC9-209ENST00000425071 B3GALT4O96024 378 aa6.71□□□□□ -1.34
HDAC9-209ENST00000425071 SELPP16109 830 aa6.71□□□□□ -1.34
HDAC9-209ENST00000425071 EIF4BP23588 611 aaKnown RBP6.71□□□□□ -1.34
HDAC9-209ENST00000425071 FCGRTP55899 365 aa6.71□□□□□ -1.34
HDAC9-209ENST00000425071 XPCQ01831 940 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-209ENST00000425071 HP1BP3Q5SSJ5 553 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-209ENST00000425071 GALNT11Q8NCW6 608 aa6.71□□□□□ -1.34
HDAC9-209ENST00000425071 KLHDC7BQ96G42 594 aa6.71□□□□□ -1.34
HDAC9-209ENST00000425071 DUSP9Q99956 384 aaKnown RBP6.71□□□□□ -1.34
HDAC9-209ENST00000425071 BCL2L13Q9BXK5 485 aa6.71□□□□□ -1.34
HDAC9-209ENST00000425071 CCDC9Q9Y3X0 531 aaKnown RBP6.71□□□□□ -1.34
HDAC9-209ENST00000425071 CYP11A1P05108 521 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 CDC25BP30305 580 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 DAB2P98082 770 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 ADGRE1Q14246 886 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 PLA2G4EQ3MJ16 856 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 TXNDC11Q6PKC3 985 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 TMC4Q7Z404 712 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 CD163Q86VB7 1156 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 SLC7A3Q8WY07 619 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 SETDB2Q96T68 719 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 OSBPL7Q9BZF2 842 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 CEP44Q9C0F1 390 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 PARP2Q9UGN5 583 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 USP21Q9UK80 565 aa6.7□□□□□ -1.34
HDAC9-209ENST00000425071 C1QTNF9BB2RNN3 333 aa6.69□□□□□ -1.34
HDAC9-209ENST00000425071 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC9-209ENST00000425071 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
HDAC9-209ENST00000425071 ZNF423Q2M1K9 1284 aa6.69□□□□□ -1.34
HDAC9-209ENST00000425071 CHRNA4P43681 627 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 PSMD2Q13200 908 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 DUOXA2Q1HG44 320 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 FOXD4L6Q3SYB3 417 aaPredicted RBP6.68□□□□□ -1.34
HDAC9-209ENST00000425071 SHISA2Q6UWI4 295 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 FOXD4L3Q6VB84 417 aaPredicted RBP6.68□□□□□ -1.34
HDAC9-209ENST00000425071 TXNRD3Q86VQ6 643 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 C3orf58Q8NDZ4 430 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 AKTIPQ9H8T0 292 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 TMEM39AQ9NV64 488 aa6.68□□□□□ -1.34
HDAC9-209ENST00000425071 MEGF11A6BM72 1044 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 SORBS3O60504 671 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 GATA4P43694 442 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 GSTM4Q03013 218 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 MBTPS1Q14703 1052 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 MRS2Q9HD23 443 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 AKAP2Q9Y2D5 859 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 SAMM50Q9Y512 469 aa6.67□□□□□ -1.34
HDAC9-209ENST00000425071 F8W735 103 aaPredicted RBP6.66□□□□□ -1.34
HDAC9-209ENST00000425071 MSTNO14793 375 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms