RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 CPSF1Q10570 1443 aaKnown RBP17.42■□□□□ 0.38
SHISA9-201ENST00000423335 RIOK3O14730 519 aaKnown RBP17.42■□□□□ 0.38
SHISA9-201ENST00000423335 PRDM1O75626 825 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 UFL1O94874 794 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 SLC12A7Q9Y666 1083 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 HSPA1LP34931 641 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 MFSD6Q6ZSS7 791 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 NCOA5Q9HCD5 579 aaKnown RBP17.42■□□□□ 0.38
SHISA9-201ENST00000423335 TLR7Q9NYK1 1049 aaKnown RBP17.42■□□□□ 0.38
SHISA9-201ENST00000423335 TTC41PQ6P2S7 1318 aa17.41■□□□□ 0.38
SHISA9-201ENST00000423335 CBFA2T2O43439 604 aa17.41■□□□□ 0.38
SHISA9-201ENST00000423335 ZAP70P43403 619 aa17.41■□□□□ 0.38
SHISA9-201ENST00000423335 CNNM3Q8NE01 707 aa17.41■□□□□ 0.38
SHISA9-201ENST00000423335 JAK2O60674 1132 aa17.41■□□□□ 0.38
SHISA9-201ENST00000423335 PARP10Q53GL7 1025 aa17.41■□□□□ 0.38
SHISA9-201ENST00000423335 SSH3Q8TE77 659 aa17.41■□□□□ 0.38
SHISA9-201ENST00000423335 ZSCAN16Q9H4T2 348 aaPredicted RBP17.41■□□□□ 0.38
SHISA9-201ENST00000423335 CDKL5O76039 1030 aa17.4■□□□□ 0.38
SHISA9-201ENST00000423335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.4■□□□□ 0.38
SHISA9-201ENST00000423335 ECM2O94769 699 aaPredicted RBP17.4■□□□□ 0.38
SHISA9-201ENST00000423335 GYG1P46976 350 aa17.4■□□□□ 0.38
SHISA9-201ENST00000423335 CCDC47Q96A33 483 aaKnown RBP17.4■□□□□ 0.38
SHISA9-201ENST00000423335 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
SHISA9-201ENST00000423335 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHISA9-201ENST00000423335 ME3Q16798 604 aa17.4■□□□□ 0.38
SHISA9-201ENST00000423335 OTUD7BQ6GQQ9 843 aa17.4■□□□□ 0.38
SHISA9-201ENST00000423335 ATG3Q9NT62 314 aa17.39■□□□□ 0.38
SHISA9-201ENST00000423335 DNAI1Q9UI46 699 aa17.39■□□□□ 0.38
SHISA9-201ENST00000423335 GOLGA8AA7E2F4 631 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 SLC27A2O14975 620 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 MBD4O95243 580 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 LIG1P18858 919 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 LRMPQ12912 555 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 CCDC96Q2M329 555 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 KIF2CQ99661 725 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
SHISA9-201ENST00000423335 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 ARHGAP29Q52LW3 1261 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 PI16Q6UXB8 463 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
SHISA9-201ENST00000423335 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.37
SHISA9-201ENST00000423335 RPS8P62241 208 aaKnown RBP17.38■□□□□ 0.37
SHISA9-201ENST00000423335 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
SHISA9-201ENST00000423335 MCM9Q9NXL9 1143 aa17.38■□□□□ 0.37
SHISA9-201ENST00000423335 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
SHISA9-201ENST00000423335 BAG3O95817 575 aa17.38■□□□□ 0.37
SHISA9-201ENST00000423335 SMARCE1Q969G3 411 aa17.38■□□□□ 0.37
SHISA9-201ENST00000423335 CCDC43Q96MW1 224 aaKnown RBP17.38■□□□□ 0.37
SHISA9-201ENST00000423335 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
SHISA9-201ENST00000423335 SOGA3Q5TF21 947 aa17.38■□□□□ 0.37
SHISA9-201ENST00000423335 CTCFLQ8NI51 663 aaPredicted RBP17.38■□□□□ 0.37
SHISA9-201ENST00000423335 CBX8Q9HC52 389 aa17.38■□□□□ 0.37
SHISA9-201ENST00000423335 DHX8Q14562 1220 aaKnown RBP17.37■□□□□ 0.37
SHISA9-201ENST00000423335 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
SHISA9-201ENST00000423335 ARMT1Q9H993 441 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 VEZTQ9HBM0 779 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 MAP3K15Q6ZN16 1313 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 SSBP05455 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHISA9-201ENST00000423335 ADORA1P30542 326 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 BCAMP50895 628 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 FAM193AP78312 1265 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 MRPS27Q92552 414 aaKnown RBP17.37■□□□□ 0.37
SHISA9-201ENST00000423335 ZHX3Q9H4I2 956 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
SHISA9-201ENST00000423335 LDHCP07864 332 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 GTF2F1P35269 517 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHISA9-201ENST00000423335 CTSWP56202 376 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 NBPF14Q5TI25 921 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 NCOA7Q8NI08 942 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 ZNF500O60304 480 aaPredicted RBP17.37■□□□□ 0.37
SHISA9-201ENST00000423335 MYRIPQ8NFW9 859 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 CCDC102AQ96A19 550 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 PAXBP1Q9Y5B6 917 aa17.37■□□□□ 0.37
SHISA9-201ENST00000423335 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 KIF2AO00139 706 aaPredicted RBP17.36■□□□□ 0.37
SHISA9-201ENST00000423335 GNG11P61952 73 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 ZFP91Q96JP5 570 aaPredicted RBP17.36■□□□□ 0.37
SHISA9-201ENST00000423335 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
SHISA9-201ENST00000423335 RUFY1Q96T51 708 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 SAP30BPQ9UHR5 308 aaKnown RBP17.36■□□□□ 0.37
SHISA9-201ENST00000423335 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 NEMFO60524 1076 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 RXRBP28702 533 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
SHISA9-201ENST00000423335 GSDMDP57764 484 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 SLC26A6Q9BXS9 759 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 IFNKQ9P0W0 207 aa17.36■□□□□ 0.37
SHISA9-201ENST00000423335 EPB41L2O43491 1005 aaKnown RBP17.35■□□□□ 0.37
SHISA9-201ENST00000423335 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
SHISA9-201ENST00000423335 SYKP43405 635 aa17.35■□□□□ 0.37
SHISA9-201ENST00000423335 UBASH3AP57075 661 aa17.35■□□□□ 0.37
SHISA9-201ENST00000423335 TTLL12Q14166 644 aaPredicted RBP17.35■□□□□ 0.37
SHISA9-201ENST00000423335 PUM3Q15397 648 aaKnown RBP17.35■□□□□ 0.37
SHISA9-201ENST00000423335 KIF4BQ2VIQ3 1234 aa17.35■□□□□ 0.37
SHISA9-201ENST00000423335 CRNKL1Q9BZJ0 848 aaKnown RBP17.35■□□□□ 0.37
SHISA9-201ENST00000423335 PODXL2Q9NZ53 605 aa17.35■□□□□ 0.37
SHISA9-201ENST00000423335 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
SHISA9-201ENST00000423335 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms