RNA–Protein interactions for RNA: ENST00000422465.6

RPS3-202, Transcript of ribosomal protein S3, humanhuman

TSL 2

Gene RPS3, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-202ENST00000422465 BAG4O95429 457 aaKnown RBP12.54□□□□□ -0.4
RPS3-202ENST00000422465 GYS1P13807 737 aa12.54□□□□□ -0.4
RPS3-202ENST00000422465 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
RPS3-202ENST00000422465 INTS4Q96HW7 963 aaKnown RBP12.54□□□□□ -0.4
RPS3-202ENST00000422465 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
RPS3-202ENST00000422465 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
RPS3-202ENST00000422465 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
RPS3-202ENST00000422465 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
RPS3-202ENST00000422465 GLTPD2A6NH11 291 aa12.53□□□□□ -0.4
RPS3-202ENST00000422465 H7C1W4 665 aa12.53□□□□□ -0.4
RPS3-202ENST00000422465 HIP1O00291 1037 aa12.53□□□□□ -0.4
RPS3-202ENST00000422465 RPS6KA4O75676 772 aa12.53□□□□□ -0.4
RPS3-202ENST00000422465 ZGPATQ8N5A5 531 aaKnown RBP12.53□□□□□ -0.4
RPS3-202ENST00000422465 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
RPS3-202ENST00000422465 DIAPH3Q9NSV4 1193 aa12.53□□□□□ -0.4
RPS3-202ENST00000422465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.53□□□□□ -0.4
RPS3-202ENST00000422465 TJP1Q07157 1748 aa12.53□□□□□ -0.4
RPS3-202ENST00000422465 GOLGA6L22H0YM25 854 aa12.52□□□□□ -0.41
RPS3-202ENST00000422465 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
RPS3-202ENST00000422465 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
RPS3-202ENST00000422465 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.41
RPS3-202ENST00000422465 PRDM10Q9NQV6 1147 aa12.52□□□□□ -0.41
RPS3-202ENST00000422465 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
RPS3-202ENST00000422465 ISY1Q9ULR0 285 aaKnown RBP12.52□□□□□ -0.41
RPS3-202ENST00000422465 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.41
RPS3-202ENST00000422465 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
RPS3-202ENST00000422465 SBF1O95248 1867 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 A0A087WZG4 1122 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 ATP5J2-PTCD1G3V325 749 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 PTCD1O75127 700 aaKnown RBP12.51□□□□□ -0.41
RPS3-202ENST00000422465 LMNB1P20700 586 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 FOXO4P98177 505 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 CWC27Q6UX04 472 aaKnown RBP12.51□□□□□ -0.41
RPS3-202ENST00000422465 TTLL7Q6ZT98 887 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 UBE3BQ7Z3V4 1068 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 TTC14Q96N46 770 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 CCDC8Q9H0W5 538 aaPredicted RBP12.51□□□□□ -0.41
RPS3-202ENST00000422465 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 RFX7Q2KHR2 1363 aa12.51□□□□□ -0.41
RPS3-202ENST00000422465 A1BGP04217 495 aa12.5□□□□□ -0.41
RPS3-202ENST00000422465 ATP5JP18859 108 aa12.5□□□□□ -0.41
RPS3-202ENST00000422465 KLHDC4Q8TBB5 520 aa12.5□□□□□ -0.41
RPS3-202ENST00000422465 TM6SF1Q9BZW5 370 aa12.5□□□□□ -0.41
RPS3-202ENST00000422465 SIL1Q9H173 461 aa12.5□□□□□ -0.41
RPS3-202ENST00000422465 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
RPS3-202ENST00000422465 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
RPS3-202ENST00000422465 COL5A3P25940 1745 aaPredicted RBP12.49□□□□□ -0.41
RPS3-202ENST00000422465 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
RPS3-202ENST00000422465 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
RPS3-202ENST00000422465 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
RPS3-202ENST00000422465 JARID2Q92833 1246 aaPredicted RBP12.49□□□□□ -0.41
RPS3-202ENST00000422465 ISCA1Q9BUE6 129 aa12.49□□□□□ -0.41
RPS3-202ENST00000422465 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
RPS3-202ENST00000422465 MED23Q9ULK4 1368 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 CCDC171Q6TFL3 1326 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 BRD1O95696 1058 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 PTH1RQ03431 593 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 TFCP2Q12800 502 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 NMIQ13287 307 aaPredicted RBP12.48□□□□□ -0.41
RPS3-202ENST00000422465 PKP1Q13835 747 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 SMYD5Q6GMV2 418 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 AIDAQ96BJ3 306 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
RPS3-202ENST00000422465 UPF3BQ9BZI7 483 aaKnown RBP12.48□□□□□ -0.41
RPS3-202ENST00000422465 GPR108Q9NPR9 543 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
RPS3-202ENST00000422465 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
RPS3-202ENST00000422465 MAP3K7O43318 606 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 CTCFP49711 727 aaPredicted RBP12.47□□□□□ -0.41
RPS3-202ENST00000422465 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
RPS3-202ENST00000422465 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 TSR1Q2NL82 804 aaKnown RBP12.47□□□□□ -0.41
RPS3-202ENST00000422465 KLHL40Q2TBA0 621 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 TICAM2Q86XR7 235 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 MAP4K1Q92918 833 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 GZF1Q9H116 711 aaPredicted RBP12.47□□□□□ -0.41
RPS3-202ENST00000422465 BOLA2Q9H3K6 86 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
RPS3-202ENST00000422465 CHRNA5P30532 468 aa12.46□□□□□ -0.41
RPS3-202ENST00000422465 PSEN2P49810 448 aa12.46□□□□□ -0.41
RPS3-202ENST00000422465 MRE11P49959 708 aa12.46□□□□□ -0.41
RPS3-202ENST00000422465 TCIRG1Q13488 830 aa12.46□□□□□ -0.41
RPS3-202ENST00000422465 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.41
RPS3-202ENST00000422465 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
RPS3-202ENST00000422465 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
RPS3-202ENST00000422465 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
RPS3-202ENST00000422465 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 CIAO1O76071 339 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 XRCC6P12956 609 aaKnown RBP eCLIP12.45□□□□□ -0.426e-7■■■■□ 23.1
RPS3-202ENST00000422465 PBX2P40425 430 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 IL15P40933 162 aaPredicted RBP12.45□□□□□ -0.42
RPS3-202ENST00000422465 RASSF7Q02833 373 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 DDR1Q08345 913 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 VPS53Q5VIR6 699 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 PRPF40BQ6NWY9 871 aaKnown RBP12.45□□□□□ -0.42
RPS3-202ENST00000422465 RUFY3Q7L099 469 aa12.45□□□□□ -0.42
RPS3-202ENST00000422465 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms