RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RSPH6AQ9H0K4 717 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 COL3A1P02461 1466 aaPredicted RBP15.77■□□□□ 0.11
UFD1-203ENST00000421968 HTATSF1O43719 755 aaKnown RBP15.76■□□□□ 0.11
UFD1-203ENST00000421968 ANXA1P04083 346 aa15.76■□□□□ 0.11
UFD1-203ENST00000421968 OSBPP22059 807 aa15.76■□□□□ 0.11
UFD1-203ENST00000421968 AIMP1Q12904 312 aaKnown RBP15.76■□□□□ 0.11
UFD1-203ENST00000421968 NBPF12Q5TAG4 269 aaPredicted RBP15.76■□□□□ 0.11
UFD1-203ENST00000421968 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
UFD1-203ENST00000421968 FAM89AQ96GI7 184 aa15.76■□□□□ 0.11
UFD1-203ENST00000421968 ZBED3Q96IU2 234 aaPredicted RBP15.76■□□□□ 0.11
UFD1-203ENST00000421968 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
UFD1-203ENST00000421968 MYPNQ86TC9 1320 aa15.75■□□□□ 0.11
UFD1-203ENST00000421968 PRUNE2Q8WUY3 3088 aa15.75■□□□□ 0.11
UFD1-203ENST00000421968 FMNL1O95466 1100 aaPredicted RBP15.75■□□□□ 0.11
UFD1-203ENST00000421968 CTGFP29279 349 aa15.75■□□□□ 0.11
UFD1-203ENST00000421968 STRIP1Q5VSL9 837 aa15.75■□□□□ 0.11
UFD1-203ENST00000421968 KIAA0825Q8IV33 1275 aa15.75■□□□□ 0.11
UFD1-203ENST00000421968 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
UFD1-203ENST00000421968 PDIA6Q15084 440 aa15.74■□□□□ 0.11
UFD1-203ENST00000421968 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
UFD1-203ENST00000421968 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
UFD1-203ENST00000421968 NECAB2Q7Z6G3 386 aa15.74■□□□□ 0.11
UFD1-203ENST00000421968 HELBQ8NG08 1087 aaPredicted RBP15.74■□□□□ 0.11
UFD1-203ENST00000421968 XDHP47989 1333 aa15.73■□□□□ 0.11
UFD1-203ENST00000421968 EIF2S2P20042 333 aaKnown RBP15.73■□□□□ 0.11
UFD1-203ENST00000421968 ATP2B4P23634 1241 aa15.73■□□□□ 0.11
UFD1-203ENST00000421968 DLGAP5Q15398 846 aa15.73■□□□□ 0.11
UFD1-203ENST00000421968 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
UFD1-203ENST00000421968 DEFB118Q96PH6 123 aa15.73■□□□□ 0.11
UFD1-203ENST00000421968 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
UFD1-203ENST00000421968 EYSQ5T1H1 3165 aa15.73■□□□□ 0.11
UFD1-203ENST00000421968 OTOFQ9HC10 1997 aa15.73■□□□□ 0.11
UFD1-203ENST00000421968 NCOR1O75376 2440 aa15.72■□□□□ 0.11
UFD1-203ENST00000421968 CAPN2P17655 700 aa15.72■□□□□ 0.11
UFD1-203ENST00000421968 MAP3K12Q12852 859 aa15.72■□□□□ 0.11
UFD1-203ENST00000421968 ZNF697Q5TEC3 545 aa15.72■□□□□ 0.11
UFD1-203ENST00000421968 XAGE3Q8WTP9 111 aa15.72■□□□□ 0.11
UFD1-203ENST00000421968 CDX2Q99626 313 aaPredicted RBP15.72■□□□□ 0.11
UFD1-203ENST00000421968 MUC3AQ02505 3323 aa15.71■□□□□ 0.11
UFD1-203ENST00000421968 ZNF804BA4D1E1 1349 aa15.71■□□□□ 0.11
UFD1-203ENST00000421968 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
UFD1-203ENST00000421968 SLAIN1Q8ND83 568 aa15.71■□□□□ 0.11
UFD1-203ENST00000421968 DIS3LQ8TF46 1054 aaKnown RBP15.71■□□□□ 0.11
UFD1-203ENST00000421968 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
UFD1-203ENST00000421968 CPA4Q9UI42 421 aa15.71■□□□□ 0.11
UFD1-203ENST00000421968 PIEZO1Q92508 2521 aa15.71■□□□□ 0.11
UFD1-203ENST00000421968 CLRN2A0PK11 232 aa15.7■□□□□ 0.1
UFD1-203ENST00000421968 BTBD19C9JJ37 291 aa15.7■□□□□ 0.1
UFD1-203ENST00000421968 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
UFD1-203ENST00000421968 PRKCZQ05513 592 aa15.7■□□□□ 0.1
UFD1-203ENST00000421968 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
UFD1-203ENST00000421968 C17orf99Q6UX52 265 aa15.7■□□□□ 0.1
UFD1-203ENST00000421968 ZCCHC17Q9NP64 241 aaKnown RBP15.7■□□□□ 0.1
UFD1-203ENST00000421968 MYO1BO43795 1136 aa15.69■□□□□ 0.1
UFD1-203ENST00000421968 CETPP11597 493 aa15.69■□□□□ 0.1
UFD1-203ENST00000421968 TJAP1Q5JTD0 557 aa15.69■□□□□ 0.1
UFD1-203ENST00000421968 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.69■□□□□ 0.1
UFD1-203ENST00000421968 FAM205AQ6ZU69 1335 aa15.68■□□□□ 0.1
UFD1-203ENST00000421968 MED23Q9ULK4 1368 aa15.68■□□□□ 0.1
UFD1-203ENST00000421968 VGLL4Q14135 290 aa15.68■□□□□ 0.1
UFD1-203ENST00000421968 RASA3Q14644 834 aa15.68■□□□□ 0.1
UFD1-203ENST00000421968 COA1Q9GZY4 146 aa15.68■□□□□ 0.1
UFD1-203ENST00000421968 ECM29Q5VYK3 1845 aa15.67■□□□□ 0.1
UFD1-203ENST00000421968 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
UFD1-203ENST00000421968 ADCY3O60266 1144 aa15.67■□□□□ 0.1
UFD1-203ENST00000421968 INHAP05111 366 aa15.67■□□□□ 0.1
UFD1-203ENST00000421968 CRISPLD2Q9H0B8 497 aa15.67■□□□□ 0.1
UFD1-203ENST00000421968 PCDHAC2Q9Y5I4 1007 aa15.67■□□□□ 0.1
UFD1-203ENST00000421968 CSADQ9Y600 493 aa15.67■□□□□ 0.1
UFD1-203ENST00000421968 LAMA2P24043 3122 aaKnown RBP15.66■□□□□ 0.1
UFD1-203ENST00000421968 U2AF1L5P0DN76 240 aaPredicted RBP15.66■□□□□ 0.1
UFD1-203ENST00000421968 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
UFD1-203ENST00000421968 U2AF1Q01081 240 aaKnown RBP eCLIP15.66■□□□□ 0.11e-8■■■□□ 18.7
UFD1-203ENST00000421968 ADGRA2Q96PE1 1338 aa15.66■□□□□ 0.1
UFD1-203ENST00000421968 ELNP15502 786 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 FCGRTP55899 365 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 GTF2IP78347 998 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 MTMR14Q8NCE2 650 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 MYLIPQ8WY64 445 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 ISCA1Q9BUE6 129 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 PAK6Q9NQU5 681 aaPredicted RBP15.65■□□□□ 0.1
UFD1-203ENST00000421968 GABRQQ9UN88 632 aa15.65■□□□□ 0.1
UFD1-203ENST00000421968 MDM2Q00987 491 aaPredicted RBP15.64■□□□□ 0.09
UFD1-203ENST00000421968 SNAPC2Q13487 334 aa15.64■□□□□ 0.09
UFD1-203ENST00000421968 CNGB1Q14028 1251 aaPredicted RBP15.64■□□□□ 0.09
UFD1-203ENST00000421968 CCDC152Q4G0S7 254 aa15.64■□□□□ 0.09
UFD1-203ENST00000421968 CCDC85AQ96PX6 553 aaPredicted RBP15.64■□□□□ 0.09
UFD1-203ENST00000421968 NBPF3Q9H094 633 aa15.64■□□□□ 0.09
UFD1-203ENST00000421968 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
UFD1-203ENST00000421968 SYNGAP1Q96PV0 1343 aa15.64■□□□□ 0.09
UFD1-203ENST00000421968 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
UFD1-203ENST00000421968 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
UFD1-203ENST00000421968 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
UFD1-203ENST00000421968 CFAP100Q494V2 611 aa15.63■□□□□ 0.09
UFD1-203ENST00000421968 ANKLE1Q8NAG6 615 aa15.63■□□□□ 0.09
UFD1-203ENST00000421968 SNX27Q96L92 541 aa15.63■□□□□ 0.09
UFD1-203ENST00000421968 PRMT6Q96LA8 375 aaPredicted RBP15.63■□□□□ 0.09
UFD1-203ENST00000421968 SEMA6BQ9H3T3 888 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms