RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 TAF1CQ15572 869 aaPredicted RBP8.6□□□□□ -1.03
PMS1-208ENST00000421722 UBE2Q1Q7Z7E8 422 aa8.6□□□□□ -1.03
PMS1-208ENST00000421722 MYD88Q99836 296 aa8.6□□□□□ -1.03
PMS1-208ENST00000421722 ZBTB7BO15156 539 aaPredicted RBP8.59□□□□□ -1.03
PMS1-208ENST00000421722 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
PMS1-208ENST00000421722 CAP1Q01518 475 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 TNFAIP1Q13829 316 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 DUSP27Q5VZP5 1158 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 DPF3Q92784 378 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 OPTNQ96CV9 577 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 HOXD10P28358 340 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 IGHMBP2P38935 993 aaKnown RBP8.59□□□□□ -1.03
PMS1-208ENST00000421722 GTF2IP78347 998 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
PMS1-208ENST00000421722 TTLL11Q8NHH1 800 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 BRI3BPQ8WY22 251 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 SHISA4Q96DD7 197 aa8.59□□□□□ -1.03
PMS1-208ENST00000421722 RNF216Q9NWF9 866 aaPredicted RBP8.59□□□□□ -1.03
PMS1-208ENST00000421722 MYH3P11055 1940 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 CCL15-CCL14A0A0B4J2E2 113 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 CCL15Q16663 113 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 KRT24Q2M2I5 525 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 CFAP100Q494V2 611 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 NBPF12Q5TAG4 269 aaPredicted RBP8.58□□□□□ -1.04
PMS1-208ENST00000421722 PLA2G12BQ9BX93 195 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 CD209Q9NNX6 404 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 OTOFQ9HC10 1997 aa8.58□□□□□ -1.04
PMS1-208ENST00000421722 TLR2O60603 784 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 GJB1P08034 283 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 CETPP11597 493 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
PMS1-208ENST00000421722 CCER1Q8TC90 406 aaPredicted RBP8.57□□□□□ -1.04
PMS1-208ENST00000421722 ZNF428Q96B54 188 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 SPEF2Q9C093 1822 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 ELP3Q9H9T3 547 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 IRS2Q9Y4H2 1338 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 IL1R1P14778 569 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 GJA8P48165 433 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 RASA3Q14644 834 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 FZD1Q9UP38 647 aa8.57□□□□□ -1.04
PMS1-208ENST00000421722 SPDYE2Q495Y8 402 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 TXNRD3Q86VQ6 643 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 CERS5Q8N5B7 392 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 TRIM47Q96LD4 638 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 GREM2Q9H772 168 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 SRRDQ9UH36 339 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 TRIM35Q9UPQ4 493 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 ARAP2Q8WZ64 1704 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 WTIPA6NIX2 430 aaPredicted RBP8.56□□□□□ -1.04
PMS1-208ENST00000421722 SPDYE5A6NIY4 337 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 BMP8BP34820 402 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 KCNJ4P48050 445 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 TNNI2P48788 182 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 UBXN2AP68543 259 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.56□□□□□ -1.04
PMS1-208ENST00000421722 ZNF804AQ7Z570 1209 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 HOOK2Q96ED9 719 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 PRMT6Q96LA8 375 aaPredicted RBP8.56□□□□□ -1.04
PMS1-208ENST00000421722 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
PMS1-208ENST00000421722 CSADQ9Y600 493 aa8.56□□□□□ -1.04
PMS1-208ENST00000421722 FAM205AQ6ZU69 1335 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 H7C1W4 665 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 ZNF853P0CG23 659 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 FAM43AQ8N2R8 423 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.55□□□□□ -1.04
PMS1-208ENST00000421722 RUNDC1Q96C34 613 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 VEZTQ9HBM0 779 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 ZNF70Q9UC06 446 aaPredicted RBP8.55□□□□□ -1.04
PMS1-208ENST00000421722 LAS1LQ9Y4W2 734 aaKnown RBP8.55□□□□□ -1.04
PMS1-208ENST00000421722 CLRN2A0PK11 232 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 CCL5P13501 91 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 CALD1Q05682 793 aaKnown RBP8.55□□□□□ -1.04
PMS1-208ENST00000421722 PPIL2Q13356 520 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 SNAPC2Q13487 334 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 C17orf99Q6UX52 265 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 KSR2Q6VAB6 950 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 ERO1BQ86YB8 467 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 TEPSINQ96N21 525 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 PHAXQ9H814 394 aaKnown RBP8.55□□□□□ -1.04
PMS1-208ENST00000421722 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
PMS1-208ENST00000421722 SERPINA10Q9UK55 444 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
PMS1-208ENST00000421722 FARP2O94887 1054 aaPredicted RBP8.54□□□□□ -1.04
PMS1-208ENST00000421722 CSF1RP07333 972 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 GRK4P32298 578 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 NEXNQ0ZGT2 675 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 ANKRD23Q86SG2 305 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 MPHOSPH8Q99549 860 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 IFT57Q9NWB7 429 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 ADGRA2Q96PE1 1338 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 KLRK1P26718 216 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 VGLL4Q14135 290 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 RALBP1Q15311 655 aa8.54□□□□□ -1.04
PMS1-208ENST00000421722 SLAIN1Q8ND83 568 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms