RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 CHSY3Q70JA7 882 aa7.49□□□□□ -1.21
VPS8-202ENST00000421069 VN1R5Q7Z5H4 357 aa7.49□□□□□ -1.21
VPS8-202ENST00000421069 NUDT8Q8WV74 236 aa7.49□□□□□ -1.21
VPS8-202ENST00000421069 LILRB5O75023 590 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 B3GALT4O96024 378 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 ALBP02768 609 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 CABP4P57796 275 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 ZC3H6P61129 1189 aaKnown RBP7.48□□□□□ -1.21
VPS8-202ENST00000421069 PCDH1Q08174 1060 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 PWP1Q13610 501 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 ADAMTSL4Q6UY14 1074 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 NECAB3Q96P71 396 aaPredicted RBP7.48□□□□□ -1.21
VPS8-202ENST00000421069 LACRTQ9GZZ8 138 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 JPH1Q9HDC5 661 aaPredicted RBP7.48□□□□□ -1.21
VPS8-202ENST00000421069 SEC31BQ9NQW1 1179 aa7.48□□□□□ -1.21
VPS8-202ENST00000421069 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
VPS8-202ENST00000421069 EIF4EBP3O60516 100 aaPredicted RBP7.47□□□□□ -1.21
VPS8-202ENST00000421069 CELA2BP08218 269 aaPredicted RBP7.47□□□□□ -1.21
VPS8-202ENST00000421069 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
VPS8-202ENST00000421069 PPP2R3AQ06190 1150 aa7.47□□□□□ -1.21
VPS8-202ENST00000421069 FAAP100Q0VG06 881 aa7.47□□□□□ -1.21
VPS8-202ENST00000421069 GDF6Q6KF10 455 aaPredicted RBP7.47□□□□□ -1.21
VPS8-202ENST00000421069 TPTE2Q6XPS3 522 aa7.47□□□□□ -1.21
VPS8-202ENST00000421069 USP48Q86UV5 1035 aa7.47□□□□□ -1.21
VPS8-202ENST00000421069 ZNF654Q8IZM8 581 aa7.47□□□□□ -1.21
VPS8-202ENST00000421069 TMEM39AQ9NV64 488 aa7.47□□□□□ -1.21
VPS8-202ENST00000421069 SHISA8B8ZZ34 492 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 H3BRJ5 948 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 M0R082 166 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 ENC1O14682 589 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 ESRRAP11474 423 aaPredicted RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 BAG6P46379 1132 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 ZNF423Q2M1K9 1284 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 TREML4Q6UXN2 200 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 RELL1Q8IUW5 271 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 IL22RA1Q8N6P7 574 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 ZNF417Q8TAU3 575 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 WNT8BQ93098 351 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 ZNF587Q96SQ5 575 aaPredicted RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 SOX17Q9H6I2 414 aaPredicted RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 CCSER2Q9H7U1 834 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 SRA1Q9HD15 236 aaKnown RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 SH2B1Q9NRF2 756 aaPredicted RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.46□□□□□ -1.22
VPS8-202ENST00000421069 PPME1Q9Y570 386 aa7.46□□□□□ -1.22
VPS8-202ENST00000421069 FBXO24O75426 580 aa7.45□□□□□ -1.22
VPS8-202ENST00000421069 EPHA1P21709 976 aa7.45□□□□□ -1.22
VPS8-202ENST00000421069 IKBKEQ14164 716 aa7.45□□□□□ -1.22
VPS8-202ENST00000421069 GPN3Q9UHW5 284 aaPredicted RBP7.45□□□□□ -1.22
VPS8-202ENST00000421069 SAMM50Q9Y512 469 aa7.45□□□□□ -1.22
VPS8-202ENST00000421069 CELA3AP09093 270 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
VPS8-202ENST00000421069 RACK1P63244 317 aaKnown RBP7.44□□□□□ -1.22
VPS8-202ENST00000421069 PIP4K2BP78356 416 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 ZNF394Q53GI3 561 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 ILDR2Q71H61 639 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 WFDC8Q8IUA0 241 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 TMEM74Q96NL1 305 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 COPRSQ9NQ92 184 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 KBTBD4Q9NVX7 518 aa7.44□□□□□ -1.22
VPS8-202ENST00000421069 SOX1O00570 391 aaPredicted RBP7.43□□□□□ -1.22
VPS8-202ENST00000421069 AMPD1P23109 780 aa7.43□□□□□ -1.22
VPS8-202ENST00000421069 LIG3P49916 1009 aa7.43□□□□□ -1.22
VPS8-202ENST00000421069 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
VPS8-202ENST00000421069 MSL1Q68DK7 614 aa7.43□□□□□ -1.22
VPS8-202ENST00000421069 FAM117BQ6P1L5 589 aa7.43□□□□□ -1.22
VPS8-202ENST00000421069 OSGEPQ9NPF4 335 aa7.43□□□□□ -1.22
VPS8-202ENST00000421069 ENAMQ9NRM1 1142 aa7.43□□□□□ -1.22
VPS8-202ENST00000421069 NME2P22392 152 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 ARL4DP49703 201 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 COL9A3Q14050 684 aaPredicted RBP7.42□□□□□ -1.22
VPS8-202ENST00000421069 NAALADL2Q58DX5 795 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 TTBK2Q6IQ55 1244 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 AGMOQ6ZNB7 445 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 C8orf86Q6ZUL3 223 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 MAP4K3Q8IVH8 894 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 SLC43A3Q8NBI5 491 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 PHC3Q8NDX5 983 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 WHAMMQ8TF30 809 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 TRIM56Q9BRZ2 755 aaKnown RBP7.42□□□□□ -1.22
VPS8-202ENST00000421069 PCDHGB7Q9Y5F8 929 aa7.42□□□□□ -1.22
VPS8-202ENST00000421069 LINC01387J3KSC0 135 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 PAGE1O75459 146 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 NID1P14543 1247 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
VPS8-202ENST00000421069 DGKGP49619 791 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
VPS8-202ENST00000421069 C19orf57Q0VDD7 668 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 AP3B2Q13367 1082 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 PCNX4Q63HM2 1172 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 ZNF385CQ66K41 422 aaPredicted RBP7.41□□□□□ -1.22
VPS8-202ENST00000421069 EMILIN2Q9BXX0 1053 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 ACBD3Q9H3P7 528 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 KCNQ5Q9NR82 932 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 CYP8B1Q9UNU6 501 aa7.41□□□□□ -1.22
VPS8-202ENST00000421069 FSCN2O14926 492 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms