RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 CDC5LQ99459 802 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 BSDC1Q9NW68 430 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-205ENST00000419442 COL6A3P12111 3177 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 GNRH1P01148 92 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 OPTNQ96CV9 577 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 CCDC85AQ96PX6 553 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 LEMD3Q9Y2U8 911 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
RAPGEF1-205ENST00000419442 MYCP01106 439 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-205ENST00000419442 NKX2-3Q8TAU0 364 aa13.65□□□□□ -0.22
RAPGEF1-205ENST00000419442 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
RAPGEF1-205ENST00000419442 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
RAPGEF1-205ENST00000419442 A0A1B0GUL6 1792 aa13.65□□□□□ -0.22
RAPGEF1-205ENST00000419442 TLR2O60603 784 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 TMPOP42166 694 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 GJA8P48165 433 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 GTF2IP78347 998 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 LACTBP83111 547 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 MTFR1Q15390 333 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 GPR153Q6NV75 609 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 CERS5Q8N5B7 392 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 ELP3Q9H9T3 547 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 PCDHAC2Q9Y5I4 1007 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 ALPK3Q96L96 1907 aa13.64□□□□□ -0.23
RAPGEF1-205ENST00000419442 CCL15-CCL14A0A0B4J2E2 113 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 GJB1P08034 283 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 KLRK1P26718 216 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 GTF2A2P52657 109 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 CTSWP56202 376 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 CCL15Q16663 113 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 TTLL11Q8NHH1 800 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 JARID2Q92833 1246 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 MYD88Q99836 296 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 AOX1Q06278 1338 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 IRS2Q9Y4H2 1338 aa13.63□□□□□ -0.23
RAPGEF1-205ENST00000419442 CLRN2A0PK11 232 aa13.62□□□□□ -0.23
RAPGEF1-205ENST00000419442 MYO1BO43795 1136 aa13.62□□□□□ -0.23
RAPGEF1-205ENST00000419442 GOLGA2Q08379 1002 aa13.62□□□□□ -0.23
RAPGEF1-205ENST00000419442 RASA3Q14644 834 aa13.62□□□□□ -0.23
RAPGEF1-205ENST00000419442 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
RAPGEF1-205ENST00000419442 GREM2Q9H772 168 aa13.62□□□□□ -0.23
RAPGEF1-205ENST00000419442 CD209Q9NNX6 404 aa13.62□□□□□ -0.23
RAPGEF1-205ENST00000419442 FKBP1AP62942 108 aaKnown RBP13.61□□□□□ -0.23
RAPGEF1-205ENST00000419442 KIF22Q14807 665 aa13.61□□□□□ -0.23
RAPGEF1-205ENST00000419442 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
RAPGEF1-205ENST00000419442 MGAMO43451 1857 aa13.61□□□□□ -0.23
RAPGEF1-205ENST00000419442 A0A0C4DFX4 3053 aa13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 C15orf52Q6ZUT6 534 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 TEPSINQ96N21 525 aa13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 ANKRD2Q9GZV1 360 aa13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 VEZTQ9HBM0 779 aa13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 SRRDQ9UH36 339 aa13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 STXBP5LQ9Y2K9 1186 aa13.6□□□□□ -0.23
RAPGEF1-205ENST00000419442 SPDYE5A6NIY4 337 aa13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 CTGFP29279 349 aa13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 GRK4P32298 578 aa13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 MAP3K9P80192 1104 aa13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 VGLL4Q14135 290 aa13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 DUSP27Q5VZP5 1158 aa13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-205ENST00000419442 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-205ENST00000419442 CCL5P13501 91 aa13.58□□□□□ -0.24
RAPGEF1-205ENST00000419442 TNFAIP1Q13829 316 aa13.58□□□□□ -0.24
RAPGEF1-205ENST00000419442 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
RAPGEF1-205ENST00000419442 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-205ENST00000419442 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.24
RAPGEF1-205ENST00000419442 BTBD19C9JJ37 291 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 CETPP11597 493 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 IL1R1P14778 569 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 CAPN2P17655 700 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 OSBPP22059 807 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 BMP8BP34820 402 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 IGHMBP2P38935 993 aaKnown RBP13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 CDAN1Q8IWY9 1227 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 TRIM47Q96LD4 638 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 RIPOR2Q9Y4F9 1068 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 ADGRA2Q96PE1 1338 aa13.57□□□□□ -0.24
RAPGEF1-205ENST00000419442 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 HOXD10P28358 340 aa13.56□□□□□ -0.24
RAPGEF1-205ENST00000419442 PSMC4P43686 418 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms