RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 WISP1O95388 367 aa8.1□□□□□ -1.11
HMGB1P49-201ENST00000418882 FOXD4L4Q8WXT5 416 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P49-201ENST00000418882 BCO2Q9BYV7 579 aa8.1□□□□□ -1.11
HMGB1P49-201ENST00000418882 OSBPL7Q9BZF2 842 aa8.1□□□□□ -1.11
HMGB1P49-201ENST00000418882 LDHBP07195 334 aaKnown RBP8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 ESRRAP11474 423 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 ITPKAP23677 461 aa8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 ZNF423Q2M1K9 1284 aa8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 GPAT2Q6NUI2 795 aa8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 NXPE4Q6UWF7 544 aa8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 SLC7A3Q8WY07 619 aa8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 ZNF576Q9H609 170 aa8.09□□□□□ -1.11
HMGB1P49-201ENST00000418882 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
HMGB1P49-201ENST00000418882 MBTPS1Q14703 1052 aa8.08□□□□□ -1.12
HMGB1P49-201ENST00000418882 SPOCK3Q9BQ16 436 aa8.08□□□□□ -1.12
HMGB1P49-201ENST00000418882 APBA3O96018 575 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 CD68P34810 354 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 PIP4K2BP78356 416 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 PCDH1Q08174 1060 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 FAAP100Q0VG06 881 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 IKBKEQ14164 716 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 ADGRE1Q14246 886 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 TMCO4Q5TGY1 634 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 FBF1Q8TES7 1133 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 UBASH3BQ8TF42 649 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 SRA1Q9HD15 236 aaKnown RBP8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
HMGB1P49-201ENST00000418882 ALX3O95076 343 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 FCGRTP55899 365 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 CABP4P57796 275 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 COL19A1Q14993 1142 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 ALG1LQ6GMV1 187 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 IGF2-ASQ6U949 168 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 MAP4K3Q8IVH8 894 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 AGGF1Q8N302 714 aaeCLIP8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 NRSN2Q9GZP1 204 aa8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 CLEC4MQ9H2X3 399 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P49-201ENST00000418882 NOS3P29474 1203 aa8.05□□□□□ -1.12
HMGB1P49-201ENST00000418882 NLRP12P59046 1061 aa8.05□□□□□ -1.12
HMGB1P49-201ENST00000418882 EAPPQ56P03 285 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P49-201ENST00000418882 DUSP9Q99956 384 aaKnown RBP8.05□□□□□ -1.12
HMGB1P49-201ENST00000418882 USP21Q9UK80 565 aa8.05□□□□□ -1.12
HMGB1P49-201ENST00000418882 FAM177BA6PVY3 158 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 C9orf172C9J069 976 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 PRPF40AO75400 957 aaKnown RBP8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 DLGAP3O95886 979 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 C19orf57Q0VDD7 668 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 FAM117BQ6P1L5 589 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 KIAA1211Q6ZU35 1233 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 KLHL23Q8NBE8 558 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 WNT8BQ93098 351 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 NACC1Q96RE7 527 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 TRIM56Q9BRZ2 755 aaKnown RBP8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 OSGEPQ9NPF4 335 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 TRAK1Q9UPV9 953 aa8.04□□□□□ -1.12
HMGB1P49-201ENST00000418882 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 B3GALT4O96024 378 aa8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 CTSBP07858 339 aa8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 ZNF157P51786 506 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 MFAP1P55081 439 aaKnown RBP8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 PTPN12Q05209 780 aaKnown RBP8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 SUZ12Q15022 739 aaKnown RBP8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 WFDC12Q8WWY7 111 aa8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 FAM161BQ96MY7 647 aa8.03□□□□□ -1.12
HMGB1P49-201ENST00000418882 MSTNO14793 375 aa8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 ECEL1O95672 775 aa8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 IREB2P48200 963 aaKnown RBP8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 DTHD1Q6ZMT9 781 aa8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 MEGF10Q96KG7 1140 aa8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 SOX17Q9H6I2 414 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 C12orf49Q9H741 205 aa8.02□□□□□ -1.13
HMGB1P49-201ENST00000418882 LOC100289279A0A1B0GTE1 492 aa8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 GNA15P30679 374 aa8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 GATA4P43694 442 aa8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 NRG1Q02297 640 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 GSTM4Q03013 218 aa8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 TXNRD3Q86VQ6 643 aa8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 PARP2Q9UGN5 583 aa8.01□□□□□ -1.13
HMGB1P49-201ENST00000418882 FBXO24O75426 580 aa8□□□□□ -1.13
HMGB1P49-201ENST00000418882 DOC2BQ14184 412 aa8□□□□□ -1.13
HMGB1P49-201ENST00000418882 DUOXA2Q1HG44 320 aa8□□□□□ -1.13
HMGB1P49-201ENST00000418882 Q6ZS46 218 aa8□□□□□ -1.13
HMGB1P49-201ENST00000418882 TMEM130Q8N3G9 435 aa8□□□□□ -1.13
HMGB1P49-201ENST00000418882 TPSG1Q9NRR2 321 aa8□□□□□ -1.13
HMGB1P49-201ENST00000418882 USP17L7P0C7H9 530 aa7.99□□□□□ -1.13
HMGB1P49-201ENST00000418882 STK35Q8TDR2 534 aa7.99□□□□□ -1.13
HMGB1P49-201ENST00000418882 USP26Q9BXU7 913 aa7.99□□□□□ -1.13
HMGB1P49-201ENST00000418882 AKTIPQ9H8T0 292 aa7.99□□□□□ -1.13
HMGB1P49-201ENST00000418882 SPG7Q9UQ90 795 aa7.99□□□□□ -1.13
HMGB1P49-201ENST00000418882 AKAP2Q9Y2D5 859 aa7.99□□□□□ -1.13
HMGB1P49-201ENST00000418882 ARL4DP49703 201 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms