RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SMC3Q9UQE7 1217 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 LTBP1Q14766 1721 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 PDS5AQ29RF7 1337 aaKnown RBP10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 WDR19Q8NEZ3 1342 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 ANKRD31Q8N7Z5 1873 aa10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 COL1A1P02452 1464 aaPredicted RBP10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 E7EWF7 191 aa10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 ZSCAN22P10073 491 aaPredicted RBP10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 HMGB2P26583 209 aaKnown RBP10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 FAM182BQ5T319 152 aa10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 FAM196AQ6ZSG2 479 aa10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 DHX32Q7L7V1 743 aaKnown RBP10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 CCDC83Q8IWF9 413 aa10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 HELBQ8NG08 1087 aaPredicted RBP10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 PUS7LQ9H0K6 701 aaKnown RBP10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 QTRT2Q9H974 415 aaKnown RBP10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 LRRC4BQ9NT99 713 aa10.76□□□□□ -0.69
LINCMD1-201ENST00000418518 DLEC1Q9Y238 1755 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 STX6O43752 255 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 SYT1P21579 422 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 GJB2P29033 226 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 EVCP57679 992 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 WASHC4Q2M389 1173 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 MCTP1Q6DN14 999 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 TPTE2Q6XPS3 522 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 NBPF5PQ86XG9 351 aaPredicted RBP10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 PNPLA7Q6ZV29 1317 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 QSER1Q2KHR3 1735 aa10.75□□□□□ -0.69
LINCMD1-201ENST00000418518 SEMA3EO15041 775 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 PFKFB2O60825 505 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 FGAP02671 866 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 PDCP20941 246 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 TM4SF1P30408 202 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 MAP3K12Q12852 859 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 IMMTQ16891 758 aaKnown RBP10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 TRAPPC3LQ5T215 181 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 SLC9C2Q5TAH2 1124 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 Q6ZUG5 572 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 KRT27Q7Z3Y8 459 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 MB21D2Q8IYB1 491 aaPredicted RBP10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 NLRP3Q96P20 1036 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 LLPHQ9BRT6 129 aaKnown RBP10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 WWC3Q9ULE0 1092 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 MINPP1Q9UNW1 487 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 MTMR6Q9Y217 621 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 ZNF532Q9HCE3 1301 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 IRS2Q9Y4H2 1338 aa10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 BAZ2AQ9UIF9 1905 aaKnown RBP10.74□□□□□ -0.69
LINCMD1-201ENST00000418518 CDK5RAP2Q96SN8 1893 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 A0A0G2JLW4 131 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 SNAP23O00161 211 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 IGSF3O75054 1194 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 IDH1O75874 414 aaKnown RBP10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 F13A1P00488 732 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 RFC4P35249 363 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 BCAMP50895 628 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 RPS8P62241 208 aaKnown RBP10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 TTLL5Q6EMB2 1281 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 TMED8Q6PL24 325 aaPredicted RBP10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 SMIM5Q71RC9 77 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 FBXO33Q7Z6M2 555 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 NECAB1Q8N987 351 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 SMARCC2Q8TAQ2 1214 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 CELF1Q92879 486 aaKnown RBP10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 CHMP4CQ96CF2 233 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 TCEANC2Q96MN5 208 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 STRBPQ96SI9 672 aaKnown RBP10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 LARP6Q9BRS8 491 aaKnown RBP10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 ANKRD2Q9GZV1 360 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 ATP6V1DQ9Y5K8 247 aa10.73□□□□□ -0.69
LINCMD1-201ENST00000418518 MBD3O95983 291 aa10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 GTF2E1P29083 439 aaPredicted RBP10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 NFIXQ14938 502 aa10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 BICDL1Q6ZP65 573 aa10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 ZNF274Q96GC6 653 aaPredicted RBP10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 NBPF3Q9H094 633 aa10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 DDX49Q9Y6V7 483 aaKnown RBP10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 SALL1Q9NSC2 1324 aa10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 MYH2Q9UKX2 1941 aa10.72□□□□□ -0.69
LINCMD1-201ENST00000418518 GNAT2P19087 354 aa10.71□□□□□ -0.69
LINCMD1-201ENST00000418518 CRY2Q49AN0 593 aa10.71□□□□□ -0.69
LINCMD1-201ENST00000418518 C15orf52Q6ZUT6 534 aaKnown RBP10.71□□□□□ -0.69
LINCMD1-201ENST00000418518 BRF1Q92994 677 aa10.71□□□□□ -0.69
LINCMD1-201ENST00000418518 FAM84BQ96KN1 310 aaPredicted RBP10.71□□□□□ -0.69
LINCMD1-201ENST00000418518 EPB41L4AQ9HCS5 686 aaPredicted RBP10.71□□□□□ -0.69
LINCMD1-201ENST00000418518 DENND2AQ9ULE3 1009 aa10.71□□□□□ -0.69
LINCMD1-201ENST00000418518 MYH6P13533 1939 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 COL11A2P13942 1736 aaPredicted RBP10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 NID2Q14112 1375 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 PATL2C9JE40 543 aaKnown RBP10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 GYS1P13807 737 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 MCM5P33992 734 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 ANTXR2P58335 489 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 ZNF445P59923 1031 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 RBM6P78332 1123 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms