RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DCAF17Q5H9S7 520 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-205ENST00000418258 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 CBX1P83916 185 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 CEP135Q66GS9 1140 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 HAUS7Q99871 368 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 RNF216Q9NWF9 866 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-205ENST00000418258 IVNS1ABPQ9Y6Y0 642 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 TRIM75PA6NK02 468 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 MAP7D1Q3KQU3 841 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 ZSCAN22P10073 491 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-205ENST00000418258 SDSP20132 328 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 SPATA24Q86W54 205 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 SLC8A3P57103 927 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 GINS2Q9Y248 185 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
PTCH1-205ENST00000418258 ASXL1Q8IXJ9 1541 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 TSPOAP1O95153 1857 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 ANO6Q4KMQ2 910 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 RNF34Q969K3 372 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 ABCC1P33527 1531 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 UFL1O94874 794 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 FBF1Q8TES7 1133 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 FNBP1Q96RU3 617 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 PLIN2Q99541 437 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 CAVIN2O95810 425 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 CFAP58Q5T655 872 aa12.67□□□□□ -0.38
PTCH1-205ENST00000418258 IL16Q14005 1332 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 BMS1Q14692 1282 aaKnown RBP12.66□□□□□ -0.38
PTCH1-205ENST00000418258 SPOUT1Q5T280 376 aaKnown RBP12.66□□□□□ -0.38
PTCH1-205ENST00000418258 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 SMC1BQ8NDV3 1235 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 RALGAPBQ86X10 1494 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 H0YIN7 160 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 UBXN1Q04323 297 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-205ENST00000418258 AGTPBP1Q9UPW5 1226 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 FAM169AQ9Y6X4 670 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 CCDC114Q96M63 670 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 TIGD1Q96MW7 591 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 ZKSCAN3Q9BRR0 538 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 NACA2Q9H009 215 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 PLCH2O75038 1416 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 ZYXQ15942 572 aaKnown RBP12.66□□□□□ -0.38
PTCH1-205ENST00000418258 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 RBM28Q9NW13 759 aaKnown RBP12.66□□□□□ -0.38
PTCH1-205ENST00000418258 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 RXRAP19793 462 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 CCDC77Q9BR77 488 aa12.66□□□□□ -0.38
PTCH1-205ENST00000418258 CTAGE9A4FU28 777 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 NUCB1Q02818 461 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-205ENST00000418258 BIRC2Q13490 618 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 WDR44Q5JSH3 913 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 KIFC2Q96AC6 838 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 CHMP2AO43633 222 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 SMTNP53814 917 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 ZBTB16Q05516 673 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 RASA3Q14644 834 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 DISP3Q9P2K9 1392 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
PTCH1-205ENST00000418258 CCDC169A6NNP5 214 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 EAPPQ56P03 285 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-205ENST00000418258 TMX3Q96JJ7 454 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 TTC6Q86TZ1 520 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 GOLGA1Q92805 767 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 TACC1O75410 805 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 TFCP2Q12800 502 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-205ENST00000418258 BIRC3Q13489 604 aa12.65□□□□□ -0.38
PTCH1-205ENST00000418258 BICC1Q9H694 974 aaKnown RBP12.65□□□□□ -0.38
PTCH1-205ENST00000418258 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 CCNT1O60563 726 aaKnown RBP12.65□□□□□ -0.39
PTCH1-205ENST00000418258 KRT9P35527 623 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 HSPA2P54652 639 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 KIF5AQ12840 1032 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 PRKG1Q13976 671 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 KIAA1524Q8TCG1 905 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 C19orf44Q9H6X5 657 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 DENND2AQ9ULE3 1009 aa12.65□□□□□ -0.39
PTCH1-205ENST00000418258 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 CCDC65Q8IXS2 484 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 MRPS27Q92552 414 aaKnown RBP12.64□□□□□ -0.39
PTCH1-205ENST00000418258 ATP2C2O75185 946 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 CCDC6Q16204 474 aa12.64□□□□□ -0.39
PTCH1-205ENST00000418258 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms