RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 XAGE2Q96GT9 111 aa15.32■□□□□ 0.04
TNFRSF8-203ENST00000417814 DESI2Q9BSY9 194 aa15.32■□□□□ 0.04
TNFRSF8-203ENST00000417814 NAT10Q9H0A0 1025 aaKnown RBP15.32■□□□□ 0.04
TNFRSF8-203ENST00000417814 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
TNFRSF8-203ENST00000417814 FAM170AA1A519 330 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 FOXN1O15353 648 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 TPM4P67936 248 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 TMEM87AQ8NBN3 555 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 KIF18AQ8NI77 898 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 HMG20BQ9P0W2 317 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 MAPK8IP1Q9UQF2 711 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 COL15A1P39059 1388 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 SMIM5Q71RC9 77 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 MAST3O60307 1309 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 USP31Q70CQ4 1352 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 PHKG2P15735 406 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 ERCC3P19447 782 aa15.31■□□□□ 0.04
TNFRSF8-203ENST00000417814 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 ZNF202O95125 648 aa15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 GTF2E1P29083 439 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 CDC42BPGQ6DT37 1551 aa15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 ADKP55263 362 aaKnown RBP15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 KCNQ4P56696 695 aa15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 UBASH3AP57075 661 aa15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 UTP14CQ5TAP6 766 aaKnown RBP15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 SYKP43405 635 aa15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 FAM160A1Q05DH4 1040 aa15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 TRMT112Q9UI30 125 aaKnown RBP15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 USP32Q8NFA0 1604 aa15.3■□□□□ 0.04
TNFRSF8-203ENST00000417814 GPAA1O43292 621 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 TPM3P06753 285 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 METAP2P50579 478 aaKnown RBP eCLIP15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 CNNM3Q8NE01 707 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 ZNF609O15014 1411 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 NBPF26B4DH59 902 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 NBPF14Q5TI25 921 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 NBPF10Q6P3W6 841 aaKnown RBP15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 NBPF15Q8N660 670 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 SIRT1Q96EB6 747 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 PLIN2Q99541 437 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 ZSCAN16Q9H4T2 348 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 KIF20BQ96Q89 1820 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 KIF28PB7ZC32 967 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 GTF2F1P35269 517 aaKnown RBP eCLIP15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 LZTFL1Q9NQ48 299 aa15.29■□□□□ 0.04
TNFRSF8-203ENST00000417814 BAZ2BQ9UIF8 2168 aaKnown RBP15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 TMEM232C9JQI7 657 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 TDO2P48775 406 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 GYS2P54840 703 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 ARHGAP29Q52LW3 1261 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 DNAJC10Q8IXB1 793 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 TMEM67Q5HYA8 995 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 UIMC1Q96RL1 719 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 HAUS7Q99871 368 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 EYA2O00167 538 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 DPF2Q92785 391 aa15.28■□□□□ 0.04
TNFRSF8-203ENST00000417814 GOLGA8AA7E2F4 631 aa15.27■□□□□ 0.04
TNFRSF8-203ENST00000417814 GNG11P61952 73 aa15.27■□□□□ 0.04
TNFRSF8-203ENST00000417814 OLFM4Q6UX06 510 aa15.27■□□□□ 0.04
TNFRSF8-203ENST00000417814 SMYD4Q8IYR2 804 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF8-203ENST00000417814 NRKQ7Z2Y5 1582 aa15.27■□□□□ 0.04
TNFRSF8-203ENST00000417814 CPLX2Q6PUV4 134 aaKnown RBP15.27■□□□□ 0.03
TNFRSF8-203ENST00000417814 NKX2-3Q8TAU0 364 aa15.27■□□□□ 0.03
TNFRSF8-203ENST00000417814 PXDNQ92626 1479 aa15.27■□□□□ 0.03
TNFRSF8-203ENST00000417814 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 PRKAB2O43741 272 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 PFKFB1P16118 471 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 UBXN4Q92575 508 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 CARD6Q9BX69 1037 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 GTPBP4Q9BZE4 634 aaKnown RBP15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 ASAP1Q9ULH1 1129 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 TOP1P11387 765 aaKnown RBP15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 PDIA4P13667 645 aaKnown RBP15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 FANCLQ9NW38 375 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 PUF60Q9UHX1 559 aaKnown RBP15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 SMIM22K7EJ46 135 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 PFKFB2O60825 505 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
TNFRSF8-203ENST00000417814 PHACTR2O75167 634 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 KIF20AO95235 890 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 FDPSP14324 419 aaKnown RBP15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 MTX1Q13505 466 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 TDRD7Q8NHU6 1098 aaKnown RBP15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 NCOA7Q8NI08 942 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 IRX2Q9BZI1 471 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 BTBD18B2RXH4 712 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 FANCCQ00597 558 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 FBXO38Q6PIJ6 1188 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 NAPBQ9H115 298 aa15.25■□□□□ 0.03
TNFRSF8-203ENST00000417814 SPTLC3Q9NUV7 552 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms