RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 KCNA1Q09470 495 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 NCOA4Q13772 614 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 CRTC2Q53ET0 693 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 SOGA3Q5TF21 947 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 TRAF7Q6Q0C0 670 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 GPC2Q8N158 579 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 RAPGEF4Q8WZA2 1011 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 ZNF592Q92610 1267 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 FOXJ1Q92949 421 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 ZNF408Q9H9D4 720 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 NRXN2Q9P2S2 1712 aa7.58□□□□□ -1.2
ECHDC1-206ENST00000417628 PAPPA2Q9BXP8 1791 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 FAM155AB1AL88 458 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 TM4SF1P30408 202 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 HUNKP57058 714 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 KIF23Q02241 960 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 LINC01559Q495D7 138 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 TMEM164Q5U3C3 297 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 ZNF296Q8WUU4 475 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 IP6K1Q92551 441 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 ZNF622Q969S3 477 aaKnown RBP eCLIP7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 CARD14Q9BXL6 1004 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 ASAP1Q9ULH1 1129 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 FCF1Q9Y324 198 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 COL6A3P12111 3177 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 COL5A3P25940 1745 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 ZNF831Q5JPB2 1677 aa7.57□□□□□ -1.2
ECHDC1-206ENST00000417628 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 MAGEB6P1A0A0J9YX57 407 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L12C9JPN9 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L21D6R901 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 SOX1O00570 391 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 TATP17735 454 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 EN2P19622 333 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 PTK7Q13308 1070 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 RGMBQ6NW40 437 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 USP50Q70EL3 339 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 DZIP3Q86Y13 1208 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 ZNF511Q8NB15 262 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 RNF166Q96A37 237 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 CCDC85AQ96PX6 553 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 TMOD3Q9NYL9 352 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 CARMIL3Q8ND23 1372 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 BCORQ6W2J9 1755 aa7.56□□□□□ -1.2
ECHDC1-206ENST00000417628 A0A1W2PPC1 479 aa7.55□□□□□ -1.2
ECHDC1-206ENST00000417628 CYP27B1O15528 508 aa7.55□□□□□ -1.2
ECHDC1-206ENST00000417628 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-206ENST00000417628 MAP7D1Q3KQU3 841 aa7.55□□□□□ -1.2
ECHDC1-206ENST00000417628 BPHLQ86WA6 291 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-206ENST00000417628 PDZRN3Q9UPQ7 1066 aa7.55□□□□□ -1.2
ECHDC1-206ENST00000417628 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 FZD9O00144 591 aa7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 PPEF1O14829 653 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 RASA1P20936 1047 aa7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 EPS15P42566 896 aa7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 DEFB123Q8N688 67 aa7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 PKNOX2Q96KN3 472 aa7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 C1QTNF2Q9BXJ5 285 aa7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 PRO3102Q9H379 93 aa7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 KTN1Q86UP2 1357 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-206ENST00000417628 COL11A2P13942 1736 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 AFDNP55196 1824 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 ATP5J2-PTCD1G3V325 749 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 SERPINB2P05120 415 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 SCNN1DP51172 638 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 SH3BP2P78314 561 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 CLDN10P78369 228 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 NFIXQ14938 502 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 AGERQ15109 404 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 TMCO4Q5TGY1 634 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 PHLDB3Q6NSJ2 640 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 CSRNP1Q96S65 589 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 PCGF6Q9BYE7 350 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 GLIS2Q9BZE0 524 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 ZNF277Q9NRM2 450 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
ECHDC1-206ENST00000417628 SYNGAP1Q96PV0 1343 aa7.52□□□□□ -1.2
ECHDC1-206ENST00000417628 AKAP11Q9UKA4 1901 aa7.52□□□□□ -1.2
ECHDC1-206ENST00000417628 TMEM265A0A087WTH1 108 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 DKK1O94907 266 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 PDE6BP35913 854 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 ZNF157P51786 506 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 FKBP4Q02790 459 aaKnown RBP eCLIP7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 EML3Q32P44 896 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 CCDC93Q567U6 631 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 NOM1Q5C9Z4 860 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms