RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 PODXL2Q9NZ53 605 aa24.13■■□□□ 1.45
RUFY3-203ENST00000417478 KIAA1551Q9HCM1 1747 aa24.13■■□□□ 1.45
RUFY3-203ENST00000417478 HSP90AA1P07900 732 aaKnown RBP24.12■■□□□ 1.45
RUFY3-203ENST00000417478 PTGER2P43116 358 aa24.12■■□□□ 1.45
RUFY3-203ENST00000417478 SLFNL1Q499Z3 407 aa24.12■■□□□ 1.45
RUFY3-203ENST00000417478 TBC1D16Q8TBP0 767 aa24.12■■□□□ 1.45
RUFY3-203ENST00000417478 CNKSR1Q969H4 720 aa24.12■■□□□ 1.45
RUFY3-203ENST00000417478 FAM227BQ96M60 508 aa24.12■■□□□ 1.45
RUFY3-203ENST00000417478 LSG1Q9H089 658 aaKnown RBP24.12■■□□□ 1.45
RUFY3-203ENST00000417478 KCNA3P22001 575 aa24.11■■□□□ 1.45
RUFY3-203ENST00000417478 ATP2B4P23634 1241 aa24.11■■□□□ 1.45
RUFY3-203ENST00000417478 PPP1R1BQ9UD71 204 aaPredicted RBP24.11■■□□□ 1.45
RUFY3-203ENST00000417478 COL1A1P02452 1464 aaPredicted RBP24.11■■□□□ 1.45
RUFY3-203ENST00000417478 DUOX1Q9NRD9 1551 aa24.11■■□□□ 1.45
RUFY3-203ENST00000417478 NMIQ13287 307 aaPredicted RBP24.11■■□□□ 1.45
RUFY3-203ENST00000417478 FRAT2O75474 233 aaPredicted RBP24.1■■□□□ 1.45
RUFY3-203ENST00000417478 HIBADHP31937 336 aaKnown RBP24.1■■□□□ 1.45
RUFY3-203ENST00000417478 PIH1D3Q9NQM4 214 aaKnown RBP24.1■■□□□ 1.45
RUFY3-203ENST00000417478 PALD1Q9ULE6 856 aa24.1■■□□□ 1.45
RUFY3-203ENST00000417478 C6orf229H3BNL8 230 aa24.1■■□□□ 1.45
RUFY3-203ENST00000417478 A0A0D9SFI3 127 aa24.09■■□□□ 1.45
RUFY3-203ENST00000417478 MPNDQ8N594 471 aa24.09■■□□□ 1.45
RUFY3-203ENST00000417478 GNL3LQ9NVN8 582 aaKnown RBP24.09■■□□□ 1.45
RUFY3-203ENST00000417478 RFX7Q2KHR2 1363 aa24.09■■□□□ 1.45
RUFY3-203ENST00000417478 KLHL34Q8N239 644 aa24.08■■□□□ 1.45
RUFY3-203ENST00000417478 WWC3Q9ULE0 1092 aa24.08■■□□□ 1.45
RUFY3-203ENST00000417478 MCM2P49736 904 aa24.08■■□□□ 1.45
RUFY3-203ENST00000417478 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
RUFY3-203ENST00000417478 DOCK2Q92608 1830 aa24.07■■□□□ 1.44
RUFY3-203ENST00000417478 DPP8Q6V1X1 898 aaPredicted RBP24.07■■□□□ 1.44
RUFY3-203ENST00000417478 TMX4Q9H1E5 349 aaPredicted RBP24.07■■□□□ 1.44
RUFY3-203ENST00000417478 NEK4P51957 841 aa24.07■■□□□ 1.44
RUFY3-203ENST00000417478 TTLL6Q8N841 843 aa24.07■■□□□ 1.44
RUFY3-203ENST00000417478 C15orf52Q6ZUT6 534 aaKnown RBP24.06■■□□□ 1.44
RUFY3-203ENST00000417478 UTRNP46939 3433 aa24.06■■□□□ 1.44
RUFY3-203ENST00000417478 RIMBP2O15034 1052 aa24.05■■□□□ 1.44
RUFY3-203ENST00000417478 C21orf2O43822 256 aa24.05■■□□□ 1.44
RUFY3-203ENST00000417478 SEC62Q99442 399 aaKnown RBP24.05■■□□□ 1.44
RUFY3-203ENST00000417478 JAG2Q9Y219 1238 aa24.05■■□□□ 1.44
RUFY3-203ENST00000417478 BRCA1P38398 1863 aaKnown RBP24.05■■□□□ 1.44
RUFY3-203ENST00000417478 CHD4Q14839 1912 aa24.05■■□□□ 1.44
RUFY3-203ENST00000417478 IDH1O75874 414 aaKnown RBP24.04■■□□□ 1.44
RUFY3-203ENST00000417478 TGFB2P61812 414 aa24.04■■□□□ 1.44
RUFY3-203ENST00000417478 TTF1Q15361 905 aaPredicted RBP24.04■■□□□ 1.44
RUFY3-203ENST00000417478 RNF113AO15541 343 aaKnown RBP24.04■■□□□ 1.44
RUFY3-203ENST00000417478 ZNF804AQ7Z570 1209 aa24.04■■□□□ 1.44
RUFY3-203ENST00000417478 DENND2AQ9ULE3 1009 aa24.04■■□□□ 1.44
RUFY3-203ENST00000417478 MED23Q9ULK4 1368 aa24.03■■□□□ 1.44
RUFY3-203ENST00000417478 TICAM2Q86XR7 235 aa24.03■■□□□ 1.44
RUFY3-203ENST00000417478 CHAF1AQ13111 956 aaPredicted RBP24.02■■□□□ 1.44
RUFY3-203ENST00000417478 ZNF589Q86UQ0 364 aaPredicted RBP24.02■■□□□ 1.44
RUFY3-203ENST00000417478 CCDC171Q6TFL3 1326 aa24.02■■□□□ 1.44
RUFY3-203ENST00000417478 SNED1Q8TER0 1413 aa24.02■■□□□ 1.44
RUFY3-203ENST00000417478 CCDC129Q6ZRS4 1044 aa24.02■■□□□ 1.44
RUFY3-203ENST00000417478 CD209Q9NNX6 404 aa24.02■■□□□ 1.44
RUFY3-203ENST00000417478 SNX14Q9Y5W7 946 aa24.02■■□□□ 1.44
RUFY3-203ENST00000417478 SEMA3EO15041 775 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 WASHC4Q2M389 1173 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 SLC9C2Q5TAH2 1124 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 TDRD7Q8NHU6 1098 aaKnown RBP24.01■■□□□ 1.43
RUFY3-203ENST00000417478 FOXD4L1Q9NU39 408 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 ABCF2Q9UG63 623 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 PTH1RQ03431 593 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 ZMYM1Q5SVZ6 1142 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 SPON1Q9HCB6 807 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 PIM2Q9P1W9 311 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 CD2APQ9Y5K6 639 aa24.01■■□□□ 1.43
RUFY3-203ENST00000417478 KCNB2Q92953 911 aa24■■□□□ 1.43
RUFY3-203ENST00000417478 DDX24Q9GZR7 859 aaKnown RBP eCLIP24■■□□□ 1.434e-6■□□□□ 11.1
RUFY3-203ENST00000417478 ZC3H12CQ9C0D7 883 aaKnown RBP23.99■■□□□ 1.43
RUFY3-203ENST00000417478 LRP2BPQ9P2M1 347 aa23.99■■□□□ 1.43
RUFY3-203ENST00000417478 PDE6AP16499 860 aa23.99■■□□□ 1.43
RUFY3-203ENST00000417478 ADD2P35612 726 aa23.99■■□□□ 1.43
RUFY3-203ENST00000417478 RAB3GAP1Q15042 981 aa23.99■■□□□ 1.43
RUFY3-203ENST00000417478 MCMDC2Q4G0Z9 681 aa23.99■■□□□ 1.43
RUFY3-203ENST00000417478 OSBP2Q969R2 916 aa23.99■■□□□ 1.43
RUFY3-203ENST00000417478 CWC22Q9HCG8 908 aaKnown RBP23.99■■□□□ 1.43
RUFY3-203ENST00000417478 M0R2C6 588 aa23.98■■□□□ 1.43
RUFY3-203ENST00000417478 DOK7Q18PE1 504 aa23.98■■□□□ 1.43
RUFY3-203ENST00000417478 MAP4K1Q92918 833 aa23.98■■□□□ 1.43
RUFY3-203ENST00000417478 MAST3O60307 1309 aa23.98■■□□□ 1.43
RUFY3-203ENST00000417478 ZFYP08048 801 aaPredicted RBP23.98■■□□□ 1.43
RUFY3-203ENST00000417478 IL1R1P14778 569 aa23.98■■□□□ 1.43
RUFY3-203ENST00000417478 MAGEB6Q8N7X4 407 aa23.98■■□□□ 1.43
RUFY3-203ENST00000417478 NLGN2Q8NFZ4 835 aa23.98■■□□□ 1.43
RUFY3-203ENST00000417478 PDS5AQ29RF7 1337 aaKnown RBP23.97■■□□□ 1.43
RUFY3-203ENST00000417478 ZNF532Q9HCE3 1301 aa23.97■■□□□ 1.43
RUFY3-203ENST00000417478 TCRBV5S4A2TA0A5A2 114 aa23.97■■□□□ 1.43
RUFY3-203ENST00000417478 MAP3K12Q12852 859 aa23.97■■□□□ 1.43
RUFY3-203ENST00000417478 NECTIN1Q15223 517 aa23.97■■□□□ 1.43
RUFY3-203ENST00000417478 LRRFIP1Q32MZ4 808 aaKnown RBP23.97■■□□□ 1.43
RUFY3-203ENST00000417478 RASEFQ8IZ41 740 aa23.97■■□□□ 1.43
RUFY3-203ENST00000417478 RTFDC1Q9BY42 306 aaPredicted RBP23.97■■□□□ 1.43
RUFY3-203ENST00000417478 HELLSQ9NRZ9 838 aa23.97■■□□□ 1.43
RUFY3-203ENST00000417478 CC2D2BQ6DHV5 1058 aa23.96■■□□□ 1.43
RUFY3-203ENST00000417478 TMX3Q96JJ7 454 aa23.96■■□□□ 1.43
RUFY3-203ENST00000417478 UPF3BQ9BZI7 483 aaKnown RBP23.96■■□□□ 1.43
RUFY3-203ENST00000417478 PUS7LQ9H0K6 701 aaKnown RBP23.96■■□□□ 1.43
RUFY3-203ENST00000417478 DALRD3Q5D0E6 543 aaKnown RBP23.96■■□□□ 1.43
RUFY3-203ENST00000417478 ZSCAN25Q6NSZ9 544 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms