RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 IKBKEQ14164 716 aa6.78□□□□□ -1.32
TRAPPC13-203ENST00000415825 CBLL1Q75N03 491 aa6.78□□□□□ -1.32
TRAPPC13-203ENST00000415825 PMEPA1Q969W9 287 aa6.78□□□□□ -1.32
TRAPPC13-203ENST00000415825 COL26A1Q96A83 441 aa6.78□□□□□ -1.32
TRAPPC13-203ENST00000415825 ELP3Q9H9T3 547 aa6.78□□□□□ -1.32
TRAPPC13-203ENST00000415825 ITGB5P18084 799 aa6.77□□□□□ -1.33
TRAPPC13-203ENST00000415825 HP1BP3Q5SSJ5 553 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-203ENST00000415825 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-203ENST00000415825 SLC38A3Q99624 504 aa6.77□□□□□ -1.33
TRAPPC13-203ENST00000415825 STIM2Q9P246 746 aa6.77□□□□□ -1.33
TRAPPC13-203ENST00000415825 KANSL3Q9P2N6 904 aa6.77□□□□□ -1.33
TRAPPC13-203ENST00000415825 NOVA2Q9UNW9 492 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-203ENST00000415825 ACIN1Q9UKV3 1341 aaKnown RBP6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 FARP2O94887 1054 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 MAP7Q14244 749 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 PLCL1Q15111 1095 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 KSR1Q8IVT5 923 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 STK11IPQ8N1F8 1099 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 FBLIM1Q8WUP2 373 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 SUGCTQ9HAC7 445 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 LRRC4CQ9HCJ2 640 aa6.76□□□□□ -1.33
TRAPPC13-203ENST00000415825 DBX1A6NMT0 343 aa6.75□□□□□ -1.33
TRAPPC13-203ENST00000415825 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-203ENST00000415825 EXOSC6Q5RKV6 272 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-203ENST00000415825 ZAR1Q86SH2 424 aa6.75□□□□□ -1.33
TRAPPC13-203ENST00000415825 FNBP4Q8N3X1 1017 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-203ENST00000415825 MKNK1Q9BUB5 465 aa6.75□□□□□ -1.33
TRAPPC13-203ENST00000415825 SLC5A6Q9Y289 635 aa6.75□□□□□ -1.33
TRAPPC13-203ENST00000415825 TM4SF5O14894 197 aa6.74□□□□□ -1.33
TRAPPC13-203ENST00000415825 NAA30Q147X3 362 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-203ENST00000415825 BSNDQ8WZ55 320 aa6.74□□□□□ -1.33
TRAPPC13-203ENST00000415825 TMPRSS13Q9BYE2 586 aa6.74□□□□□ -1.33
TRAPPC13-203ENST00000415825 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
TRAPPC13-203ENST00000415825 ZFYVE1Q9HBF4 777 aa6.74□□□□□ -1.33
TRAPPC13-203ENST00000415825 ZNF648Q5T619 568 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-203ENST00000415825 CLUAP1Q96AJ1 413 aa6.73□□□□□ -1.33
TRAPPC13-203ENST00000415825 CDCA8Q53HL2 280 aa6.72□□□□□ -1.33
TRAPPC13-203ENST00000415825 NUDT16Q96DE0 195 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-203ENST00000415825 DZANK1Q9NVP4 752 aa6.72□□□□□ -1.33
TRAPPC13-203ENST00000415825 LOC100289279A0A1B0GTE1 492 aa6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 TIAF1O95411 115 aa6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 FBLN7Q53RD9 439 aa6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 TMEM102Q8N9M5 508 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 PAK6Q9NQU5 681 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 TMEM63CQ9P1W3 806 aa6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 PRKAG2Q9UGJ0 569 aa6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 SALL4Q9UJQ4 1053 aa6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 SOX13Q9UN79 622 aa6.71□□□□□ -1.34
TRAPPC13-203ENST00000415825 EDN3P14138 238 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 DRD2P14416 443 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 RAB6AP20340 208 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 GSTM4Q03013 218 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 SOX4Q06945 474 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 C8orf34Q49A92 452 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 ASAP3Q8TDY4 903 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 RAD18Q9NS91 495 aa6.7□□□□□ -1.34
TRAPPC13-203ENST00000415825 FAM170BA6NMN3 283 aa6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 SOX1O00570 391 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 TNFRSF10BO14763 440 aa6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 ZNF124Q15973 351 aa6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 DDX54Q8TDD1 881 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 MISP3Q96FF7 219 aa6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 OSMRQ99650 979 aa6.69□□□□□ -1.34
TRAPPC13-203ENST00000415825 ZNF792Q3KQV3 632 aa6.68□□□□□ -1.34
TRAPPC13-203ENST00000415825 C1orf127Q8N9H9 656 aa6.68□□□□□ -1.34
TRAPPC13-203ENST00000415825 C2CD4AQ8NCU7 369 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-203ENST00000415825 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-203ENST00000415825 CXXC1Q9P0U4 656 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-203ENST00000415825 ZC3H7BQ9UGR2 993 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-203ENST00000415825 PAPLNO95428 1278 aa6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 ADMP35318 185 aa6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 DNM1Q05193 864 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 OCLNQ16625 522 aa6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 DYMQ7RTS9 669 aa6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 ATG4DQ86TL0 474 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 FAM168AQ92567 244 aa6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 CNTN3Q9P232 1028 aa6.67□□□□□ -1.34
TRAPPC13-203ENST00000415825 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 CYP11A1P05108 521 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 NFICP08651 508 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 ADH5P11766 374 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 HNRNPUQ00839 825 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 XKR5Q6UX68 686 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 ARHGAP27Q6ZUM4 889 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 ZNF765Q7L2R6 523 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 TMEM40Q8WWA1 233 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 RC3H2Q9HBD1 1191 aaKnown RBP6.66□□□□□ -1.34
TRAPPC13-203ENST00000415825 NFKBIEO00221 500 aa6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 PHACTR2O75167 634 aa6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 TRPA1O75762 1119 aa6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 ACPPP15309 386 aa6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 ELOAQ14241 798 aaKnown RBP6.65□□□□□ -1.34
TRAPPC13-203ENST00000415825 FAM26DQ5JW98 314 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms