RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CERS5Q8N5B7 392 aa19.67■□□□□ 0.74
DDX56-202ENST00000415758 ECM29Q5VYK3 1845 aa19.67■□□□□ 0.74
DDX56-202ENST00000415758 ANKRD18BA2A2Z9 1011 aa19.66■□□□□ 0.74
DDX56-202ENST00000415758 IL1R1P14778 569 aa19.66■□□□□ 0.74
DDX56-202ENST00000415758 FKBP1AP62942 108 aaKnown RBP19.66■□□□□ 0.74
DDX56-202ENST00000415758 SLC10A4Q96EP9 437 aa19.66■□□□□ 0.74
DDX56-202ENST00000415758 PPP1R12BO60237 982 aaPredicted RBP19.65■□□□□ 0.74
DDX56-202ENST00000415758 FKBP5Q13451 457 aaPredicted RBP19.65■□□□□ 0.74
DDX56-202ENST00000415758 IFNL1Q8IU54 200 aa19.65■□□□□ 0.74
DDX56-202ENST00000415758 SNAP23O00161 211 aa19.64■□□□□ 0.73
DDX56-202ENST00000415758 FOXO4P98177 505 aa19.64■□□□□ 0.73
DDX56-202ENST00000415758 FZD1Q9UP38 647 aa19.64■□□□□ 0.73
DDX56-202ENST00000415758 SSC5DA1L4H1 1573 aa19.64■□□□□ 0.73
DDX56-202ENST00000415758 A0A1B0GUL6 1792 aa19.63■□□□□ 0.73
DDX56-202ENST00000415758 SPDYE2BA6NHP3 402 aa19.63■□□□□ 0.73
DDX56-202ENST00000415758 MYO1BO43795 1136 aa19.63■□□□□ 0.73
DDX56-202ENST00000415758 TAF5LO75529 589 aa19.63■□□□□ 0.73
DDX56-202ENST00000415758 SPDYE6P0CI01 402 aa19.63■□□□□ 0.73
DDX56-202ENST00000415758 IFIT5Q13325 482 aaKnown RBP19.63■□□□□ 0.73
DDX56-202ENST00000415758 SUPT20HL1Q3ZLR7 823 aa19.63■□□□□ 0.73
DDX56-202ENST00000415758 WNK4Q96J92 1243 aa19.63■□□□□ 0.73
DDX56-202ENST00000415758 PRMT6Q96LA8 375 aaPredicted RBP19.63■□□□□ 0.73
DDX56-202ENST00000415758 IGF2BP3O00425 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
DDX56-202ENST00000415758 VAMP4O75379 141 aa19.62■□□□□ 0.73
DDX56-202ENST00000415758 CFAP100Q494V2 611 aa19.62■□□□□ 0.73
DDX56-202ENST00000415758 ZNF804AQ7Z570 1209 aa19.62■□□□□ 0.73
DDX56-202ENST00000415758 HELBQ8NG08 1087 aaPredicted RBP19.62■□□□□ 0.73
DDX56-202ENST00000415758 CLMNQ96JQ2 1002 aa19.62■□□□□ 0.73
DDX56-202ENST00000415758 PCDHAC2Q9Y5I4 1007 aa19.62■□□□□ 0.73
DDX56-202ENST00000415758 INTS3Q68E01 1043 aaKnown RBP19.61■□□□□ 0.73
DDX56-202ENST00000415758 HTTP42858 3142 aa19.61■□□□□ 0.73
DDX56-202ENST00000415758 USP2O75604 605 aaPredicted RBP19.6■□□□□ 0.73
DDX56-202ENST00000415758 CCDC184Q52MB2 194 aa19.6■□□□□ 0.73
DDX56-202ENST00000415758 NBPF12Q5TAG4 269 aaPredicted RBP19.6■□□□□ 0.73
DDX56-202ENST00000415758 OTOP1Q7RTM1 612 aa19.6■□□□□ 0.73
DDX56-202ENST00000415758 TRIM17Q9Y577 477 aa19.6■□□□□ 0.73
DDX56-202ENST00000415758 CLRN2A0PK11 232 aa19.59■□□□□ 0.73
DDX56-202ENST00000415758 TESPA1A2RU30 521 aaPredicted RBP19.59■□□□□ 0.73
DDX56-202ENST00000415758 IREB2P48200 963 aaKnown RBP19.59■□□□□ 0.73
DDX56-202ENST00000415758 BEND3Q5T5X7 828 aa19.59■□□□□ 0.73
DDX56-202ENST00000415758 OTUD7BQ6GQQ9 843 aa19.59■□□□□ 0.73
DDX56-202ENST00000415758 FAM205AQ6ZU69 1335 aa19.58■□□□□ 0.73
DDX56-202ENST00000415758 FANCIQ9NVI1 1328 aa19.58■□□□□ 0.73
DDX56-202ENST00000415758 F8W031 263 aaPredicted RBP19.58■□□□□ 0.72
DDX56-202ENST00000415758 RASA3Q14644 834 aa19.58■□□□□ 0.72
DDX56-202ENST00000415758 ANKRD13AQ8IZ07 590 aa19.58■□□□□ 0.72
DDX56-202ENST00000415758 ERO1AQ96HE7 468 aa19.58■□□□□ 0.72
DDX56-202ENST00000415758 MKI67P46013 3256 aaKnown RBP19.57■□□□□ 0.72
DDX56-202ENST00000415758 CENPFP49454 3210 aa19.57■□□□□ 0.72
DDX56-202ENST00000415758 AOX1Q06278 1338 aa19.57■□□□□ 0.72
DDX56-202ENST00000415758 GJA5P36382 358 aa19.57■□□□□ 0.72
DDX56-202ENST00000415758 LMBR1LQ6UX01 489 aa19.57■□□□□ 0.72
DDX56-202ENST00000415758 LDHAL6AQ6ZMR3 332 aa19.57■□□□□ 0.72
DDX56-202ENST00000415758 VEZTQ9HBM0 779 aa19.57■□□□□ 0.72
DDX56-202ENST00000415758 PTPN22Q9Y2R2 807 aa19.57■□□□□ 0.72
DDX56-202ENST00000415758 CCDC57Q2TAC2 916 aa19.56■□□□□ 0.72
DDX56-202ENST00000415758 EPHA10Q5JZY3 1008 aa19.56■□□□□ 0.72
DDX56-202ENST00000415758 WDR63Q8IWG1 891 aa19.56■□□□□ 0.72
DDX56-202ENST00000415758 TDRD7Q8NHU6 1098 aaKnown RBP19.56■□□□□ 0.72
DDX56-202ENST00000415758 GCC1Q96CN9 775 aa19.56■□□□□ 0.72
DDX56-202ENST00000415758 PTPN18Q99952 460 aa19.56■□□□□ 0.72
DDX56-202ENST00000415758 CHMP3Q9Y3E7 222 aa19.56■□□□□ 0.72
DDX56-202ENST00000415758 RBBP6Q7Z6E9 1792 aaKnown RBP19.55■□□□□ 0.72
DDX56-202ENST00000415758 F6X3S4 739 aa19.55■□□□□ 0.72
DDX56-202ENST00000415758 CRHR2Q13324 411 aa19.55■□□□□ 0.72
DDX56-202ENST00000415758 TNFAIP1Q13829 316 aa19.55■□□□□ 0.72
DDX56-202ENST00000415758 SPDYE2Q495Y8 402 aa19.55■□□□□ 0.72
DDX56-202ENST00000415758 SERPINA10Q9UK55 444 aa19.55■□□□□ 0.72
DDX56-202ENST00000415758 KIAA0100Q14667 2235 aaKnown RBP19.54■□□□□ 0.72
DDX56-202ENST00000415758 POTEFA5A3E0 1075 aa19.54■□□□□ 0.72
DDX56-202ENST00000415758 GRM8O00222 908 aa19.54■□□□□ 0.72
DDX56-202ENST00000415758 RBM5P52756 815 aaKnown RBP eCLIP19.54■□□□□ 0.72
DDX56-202ENST00000415758 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
DDX56-202ENST00000415758 ARMC5Q96C12 935 aa19.54■□□□□ 0.72
DDX56-202ENST00000415758 ZNF594Q96JF6 807 aaPredicted RBP19.54■□□□□ 0.72
DDX56-202ENST00000415758 CNNM1Q9NRU3 951 aa19.54■□□□□ 0.72
DDX56-202ENST00000415758 ZNF70Q9UC06 446 aaPredicted RBP19.54■□□□□ 0.72
DDX56-202ENST00000415758 JAG2Q9Y219 1238 aa19.54■□□□□ 0.72
DDX56-202ENST00000415758 SP3Q02447 781 aa19.53■□□□□ 0.72
DDX56-202ENST00000415758 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
DDX56-202ENST00000415758 MFSD14BQ5SR56 506 aa19.53■□□□□ 0.72
DDX56-202ENST00000415758 CD99L2Q8TCZ2 262 aa19.53■□□□□ 0.72
DDX56-202ENST00000415758 MS4A4AQ96JQ5 239 aa19.53■□□□□ 0.72
DDX56-202ENST00000415758 TEPSINQ96N21 525 aa19.53■□□□□ 0.72
DDX56-202ENST00000415758 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.53■□□□□ 0.72
DDX56-202ENST00000415758 BRCA2P51587 3418 aa19.53■□□□□ 0.72
DDX56-202ENST00000415758 OTOFQ9HC10 1997 aa19.52■□□□□ 0.72
DDX56-202ENST00000415758 PLIN1O60240 522 aa19.52■□□□□ 0.72
DDX56-202ENST00000415758 HIBADHP31937 336 aaKnown RBP19.52■□□□□ 0.72
DDX56-202ENST00000415758 TAF7LQ5H9L4 462 aa19.52■□□□□ 0.72
DDX56-202ENST00000415758 OPTNQ96CV9 577 aa19.52■□□□□ 0.72
DDX56-202ENST00000415758 FAM84BQ96KN1 310 aaPredicted RBP19.52■□□□□ 0.72
DDX56-202ENST00000415758 EFCC1Q9HA90 598 aa19.52■□□□□ 0.72
DDX56-202ENST00000415758 TTF2Q9UNY4 1162 aaKnown RBP19.52■□□□□ 0.72
DDX56-202ENST00000415758 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.51■□□□□ 0.71
DDX56-202ENST00000415758 TDRD3Q9H7E2 651 aaKnown RBP19.51■□□□□ 0.71
DDX56-202ENST00000415758 ALDH1L1O75891 902 aa19.5■□□□□ 0.71
DDX56-202ENST00000415758 GYG1P46976 350 aa19.5■□□□□ 0.71
DDX56-202ENST00000415758 CAP1Q01518 475 aa19.5■□□□□ 0.71
DDX56-202ENST00000415758 DZIP1LQ8IYY4 767 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms