RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ELF2Q15723 593 aa23.8■■□□□ 1.4
AP1S3-205ENST00000415298 ZBTB40Q9NUA8 1239 aa23.8■■□□□ 1.4
AP1S3-205ENST00000415298 POLR3GO15318 223 aaPredicted RBP23.79■■□□□ 1.4
AP1S3-205ENST00000415298 IVLP07476 585 aa23.79■■□□□ 1.4
AP1S3-205ENST00000415298 ZNF526Q8TF50 670 aaPredicted RBP23.79■■□□□ 1.4
AP1S3-205ENST00000415298 AK7Q96M32 723 aa23.79■■□□□ 1.4
AP1S3-205ENST00000415298 TACO1Q9BSH4 297 aaKnown RBP23.79■■□□□ 1.4
AP1S3-205ENST00000415298 H2AFXP16104 143 aaPredicted RBP23.79■■□□□ 1.4
AP1S3-205ENST00000415298 RC3H1Q5TC82 1133 aaKnown RBP23.79■■□□□ 1.4
AP1S3-205ENST00000415298 EIF3CLB5ME19 914 aaKnown RBP23.78■■□□□ 1.4
AP1S3-205ENST00000415298 MTA1Q13330 715 aa23.78■■□□□ 1.4
AP1S3-205ENST00000415298 EIF3CQ99613 913 aaKnown RBP23.78■■□□□ 1.4
AP1S3-205ENST00000415298 IRX1P78414 480 aaPredicted RBP23.78■■□□□ 1.4
AP1S3-205ENST00000415298 KIF6Q6ZMV9 814 aa23.78■■□□□ 1.4
AP1S3-205ENST00000415298 USP44Q9H0E7 712 aa23.78■■□□□ 1.4
AP1S3-205ENST00000415298 C4BP0C0L5 1744 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 RPS6KA4O75676 772 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 CC2D2BQ6DHV5 1058 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 CWC22Q9HCG8 908 aaKnown RBP23.77■■□□□ 1.4
AP1S3-205ENST00000415298 PSD3Q9NYI0 1048 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 RPS6KL1Q9Y6S9 549 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 ARFGEF2Q9Y6D5 1785 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 MAP3K15Q6ZN16 1313 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 RREB1Q92766 1687 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 TPM1P09493 284 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 NUCKS1Q9H1E3 243 aaKnown RBP23.77■■□□□ 1.4
AP1S3-205ENST00000415298 COL15A1P39059 1388 aa23.77■■□□□ 1.4
AP1S3-205ENST00000415298 NBPF7P0C2Y1 421 aaPredicted RBP23.76■■□□□ 1.39
AP1S3-205ENST00000415298 LINS1Q8NG48 757 aa23.76■■□□□ 1.39
AP1S3-205ENST00000415298 CAMKK2Q96RR4 588 aa23.76■■□□□ 1.39
AP1S3-205ENST00000415298 SMC2O95347 1197 aa23.76■■□□□ 1.39
AP1S3-205ENST00000415298 TMEM132AQ24JP5 1023 aa23.76■■□□□ 1.39
AP1S3-205ENST00000415298 JAKMIP3Q5VZ66 844 aa23.76■■□□□ 1.39
AP1S3-205ENST00000415298 RTCBQ9Y3I0 505 aaKnown RBP23.76■■□□□ 1.39
AP1S3-205ENST00000415298 SCP2P22307 547 aa23.75■■□□□ 1.39
AP1S3-205ENST00000415298 NEURL1BA8MQ27 555 aa23.75■■□□□ 1.39
AP1S3-205ENST00000415298 ACTN2P35609 894 aa23.75■■□□□ 1.39
AP1S3-205ENST00000415298 NEXNQ0ZGT2 675 aa23.75■■□□□ 1.39
AP1S3-205ENST00000415298 ARHGEF1Q92888 912 aaKnown RBP23.75■■□□□ 1.39
AP1S3-205ENST00000415298 C21orf2O43822 256 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 ANKRD23Q86SG2 305 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 FAXDC2Q96IV6 333 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.74■■□□□ 1.39
AP1S3-205ENST00000415298 CAMTA2O94983 1202 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 GPTP24298 496 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 PKP1Q13835 747 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 ZNF827Q17R98 1081 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 GIGYF2Q6Y7W6 1299 aaKnown RBP23.74■■□□□ 1.39
AP1S3-205ENST00000415298 SRP68Q9UHB9 627 aaKnown RBP23.74■■□□□ 1.39
AP1S3-205ENST00000415298 NUP188Q5SRE5 1749 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 PXDNLA1KZ92 1463 aa23.74■■□□□ 1.39
AP1S3-205ENST00000415298 ATP10DQ9P241 1426 aa23.73■■□□□ 1.39
AP1S3-205ENST00000415298 CORO7P57737 925 aa23.73■■□□□ 1.39
AP1S3-205ENST00000415298 SF3B2Q13435 895 aaKnown RBP23.73■■□□□ 1.39
AP1S3-205ENST00000415298 TTC19Q6DKK2 380 aaPredicted RBP23.73■■□□□ 1.39
AP1S3-205ENST00000415298 ZSCAN16Q9H4T2 348 aaPredicted RBP23.73■■□□□ 1.39
AP1S3-205ENST00000415298 EXOC6BQ9Y2D4 811 aa23.73■■□□□ 1.39
AP1S3-205ENST00000415298 COQ9O75208 318 aa23.72■■□□□ 1.39
AP1S3-205ENST00000415298 TCIRG1Q13488 830 aa23.72■■□□□ 1.39
AP1S3-205ENST00000415298 CEP135Q66GS9 1140 aa23.72■■□□□ 1.39
AP1S3-205ENST00000415298 ERCC3P19447 782 aa23.72■■□□□ 1.39
AP1S3-205ENST00000415298 EXOC4Q96A65 974 aa23.72■■□□□ 1.39
AP1S3-205ENST00000415298 UBXN6Q9BZV1 441 aa23.72■■□□□ 1.39
AP1S3-205ENST00000415298 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.72■■□□□ 1.39
AP1S3-205ENST00000415298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.71■■□□□ 1.39
AP1S3-205ENST00000415298 RBM5P52756 815 aaKnown RBP eCLIP23.71■■□□□ 1.39
AP1S3-205ENST00000415298 GCKRQ14397 625 aa23.71■■□□□ 1.39
AP1S3-205ENST00000415298 MIEF2Q96C03 454 aa23.71■■□□□ 1.39
AP1S3-205ENST00000415298 CCDC96Q2M329 555 aa23.71■■□□□ 1.39
AP1S3-205ENST00000415298 C9orf78Q9NZ63 289 aaPredicted RBP23.71■■□□□ 1.39
AP1S3-205ENST00000415298 ALDH1L1O75891 902 aa23.7■■□□□ 1.38
AP1S3-205ENST00000415298 NAIF1Q69YI7 327 aaPredicted RBP23.7■■□□□ 1.38
AP1S3-205ENST00000415298 NUP98P52948 1817 aa23.7■■□□□ 1.38
AP1S3-205ENST00000415298 ERVV-1B6SEH8 477 aa23.7■■□□□ 1.38
AP1S3-205ENST00000415298 KIF2AO00139 706 aaPredicted RBP23.7■■□□□ 1.38
AP1S3-205ENST00000415298 TRAPPC3LQ5T215 181 aa23.7■■□□□ 1.38
AP1S3-205ENST00000415298 USPL1Q5W0Q7 1092 aa23.7■■□□□ 1.38
AP1S3-205ENST00000415298 CLCN6P51797 869 aa23.69■■□□□ 1.38
AP1S3-205ENST00000415298 REXO1L1PQ8IX06 675 aa23.69■■□□□ 1.38
AP1S3-205ENST00000415298 ISCA1Q9BUE6 129 aa23.69■■□□□ 1.38
AP1S3-205ENST00000415298 BAG6P46379 1132 aa23.68■■□□□ 1.38
AP1S3-205ENST00000415298 ZRSR1Q15695 479 aaKnown RBP23.68■■□□□ 1.38
AP1S3-205ENST00000415298 AKT1S1Q96B36 256 aa23.68■■□□□ 1.38
AP1S3-205ENST00000415298 ETAA1Q9NY74 926 aa23.68■■□□□ 1.38
AP1S3-205ENST00000415298 TFCP2L1Q9NZI6 479 aa23.68■■□□□ 1.38
AP1S3-205ENST00000415298 N4BP2Q86UW6 1770 aaPredicted RBP23.68■■□□□ 1.38
AP1S3-205ENST00000415298 GRM8O00222 908 aa23.68■■□□□ 1.38
AP1S3-205ENST00000415298 ZRANB2O95218 330 aaKnown RBP eCLIP23.68■■□□□ 1.38
AP1S3-205ENST00000415298 SLU7O95391 586 aaKnown RBP23.68■■□□□ 1.38
AP1S3-205ENST00000415298 LEKR1Q6ZMV7 388 aa23.68■■□□□ 1.38
AP1S3-205ENST00000415298 TATDN2Q93075 761 aa23.68■■□□□ 1.38
AP1S3-205ENST00000415298 A0A087WZG4 1122 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 UBTFL1P0CB47 393 aaPredicted RBP23.67■■□□□ 1.38
AP1S3-205ENST00000415298 SIRT2Q8IXJ6 389 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 SYNE4Q8N205 404 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 ZDHHC9Q9Y397 364 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 UBR3Q6ZT12 1888 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 AFDNP55196 1824 aaKnown RBP23.67■■□□□ 1.38
AP1S3-205ENST00000415298 UBN2Q6ZU65 1347 aa23.67■■□□□ 1.38
AP1S3-205ENST00000415298 RFC4P35249 363 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms