RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 N4BP2Q86UW6 1770 aaPredicted RBP11.71□□□□□ -0.54
LINC01888-201ENST00000415138 MYH3P11055 1940 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 IBTKQ9P2D0 1353 aaPredicted RBP11.7□□□□□ -0.54
LINC01888-201ENST00000415138 UBN2Q6ZU65 1347 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
LINC01888-201ENST00000415138 ERFEQ4G0M1 354 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 ATF7IPQ6VMQ6 1270 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 ZBTB38Q8NAP3 1195 aaPredicted RBP11.7□□□□□ -0.54
LINC01888-201ENST00000415138 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 SYT17Q9BSW7 474 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 CACNA1SQ13698 1873 aa11.7□□□□□ -0.54
LINC01888-201ENST00000415138 NTSR2O95665 410 aa11.69□□□□□ -0.54
LINC01888-201ENST00000415138 PCCAP05165 728 aaPredicted RBP11.69□□□□□ -0.54
LINC01888-201ENST00000415138 GCKRQ14397 625 aa11.69□□□□□ -0.54
LINC01888-201ENST00000415138 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
LINC01888-201ENST00000415138 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
LINC01888-201ENST00000415138 RPGRQ92834 1020 aaKnown RBP11.69□□□□□ -0.54
LINC01888-201ENST00000415138 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
LINC01888-201ENST00000415138 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
LINC01888-201ENST00000415138 IGKV5-2P06315 115 aa11.68□□□□□ -0.54
LINC01888-201ENST00000415138 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
LINC01888-201ENST00000415138 CLUAP1Q96AJ1 413 aa11.68□□□□□ -0.54
LINC01888-201ENST00000415138 TMX4Q9H1E5 349 aaPredicted RBP11.68□□□□□ -0.54
LINC01888-201ENST00000415138 PIM2Q9P1W9 311 aa11.68□□□□□ -0.54
LINC01888-201ENST00000415138 ISY1Q9ULR0 285 aaKnown RBP11.68□□□□□ -0.54
LINC01888-201ENST00000415138 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
LINC01888-201ENST00000415138 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 PDE8AO60658 829 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
LINC01888-201ENST00000415138 ALDH1B1P30837 517 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
LINC01888-201ENST00000415138 SLC10A5Q5PT55 438 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 UBE3BQ7Z3V4 1068 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 DZIP1LQ8IYY4 767 aaKnown RBP11.67□□□□□ -0.54
LINC01888-201ENST00000415138 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
LINC01888-201ENST00000415138 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
LINC01888-201ENST00000415138 PXDNLA1KZ92 1463 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 C10orf71Q711Q0 1435 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 LAMB2P55268 1798 aa11.67□□□□□ -0.54
LINC01888-201ENST00000415138 DDX60Q8IY21 1712 aaKnown RBP11.66□□□□□ -0.54
LINC01888-201ENST00000415138 GRM8O00222 908 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 TRIM27P14373 513 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 NPR1P16066 1061 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 DPEP1P16444 411 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 GPR162Q16538 588 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
LINC01888-201ENST00000415138 JARID2Q92833 1246 aaPredicted RBP11.66□□□□□ -0.54
LINC01888-201ENST00000415138 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 TSPYL1Q9H0U9 437 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 DLEC1Q9Y238 1755 aa11.66□□□□□ -0.54
LINC01888-201ENST00000415138 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
LINC01888-201ENST00000415138 H7C1W4 665 aa11.65□□□□□ -0.54
LINC01888-201ENST00000415138 CHRNA5P30532 468 aa11.65□□□□□ -0.54
LINC01888-201ENST00000415138 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
LINC01888-201ENST00000415138 DALRD3Q5D0E6 543 aaKnown RBP11.65□□□□□ -0.54
LINC01888-201ENST00000415138 DNTTIP2Q5QJE6 756 aaKnown RBP11.65□□□□□ -0.54
LINC01888-201ENST00000415138 SMYD5Q6GMV2 418 aa11.65□□□□□ -0.54
LINC01888-201ENST00000415138 ITPRIPQ8IWB1 547 aa11.65□□□□□ -0.54
LINC01888-201ENST00000415138 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.54
LINC01888-201ENST00000415138 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
LINC01888-201ENST00000415138 GNAI3P08754 354 aa11.64□□□□□ -0.55
LINC01888-201ENST00000415138 UBTFL1P0CB47 393 aaPredicted RBP11.64□□□□□ -0.55
LINC01888-201ENST00000415138 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
LINC01888-201ENST00000415138 STYK1Q6J9G0 422 aa11.64□□□□□ -0.55
LINC01888-201ENST00000415138 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.64□□□□□ -0.55
LINC01888-201ENST00000415138 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
LINC01888-201ENST00000415138 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
LINC01888-201ENST00000415138 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
LINC01888-201ENST00000415138 GEMIN8Q9NWZ8 242 aaKnown RBP11.64□□□□□ -0.55
LINC01888-201ENST00000415138 KCNG1Q9UIX4 513 aa11.64□□□□□ -0.55
LINC01888-201ENST00000415138 BCS1LQ9Y276 419 aa11.64□□□□□ -0.55
LINC01888-201ENST00000415138 RIC1Q4ADV7 1423 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 PLIN1O60240 522 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 SRGNP10124 158 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 NBPF20Q3BBV1 942 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 TJAP1Q5JTD0 557 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 TMEM57Q8N5G2 664 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 MTRQ99707 1265 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 IL21Q9HBE4 155 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 ZHX1Q9UKY1 873 aaPredicted RBP11.63□□□□□ -0.55
LINC01888-201ENST00000415138 WWC3Q9ULE0 1092 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 BRCA1P38398 1863 aaKnown RBP11.63□□□□□ -0.55
LINC01888-201ENST00000415138 ABCC12Q96J65 1359 aa11.63□□□□□ -0.55
LINC01888-201ENST00000415138 ABCC4O15439 1325 aa11.62□□□□□ -0.55
LINC01888-201ENST00000415138 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
LINC01888-201ENST00000415138 APPP05067 770 aa11.62□□□□□ -0.55
LINC01888-201ENST00000415138 APLP1P51693 650 aa11.62□□□□□ -0.55
LINC01888-201ENST00000415138 SF3B3Q15393 1217 aaKnown RBP11.62□□□□□ -0.55
LINC01888-201ENST00000415138 PSMD1Q99460 953 aa11.62□□□□□ -0.55
LINC01888-201ENST00000415138 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
LINC01888-201ENST00000415138 ARFGEF1Q9Y6D6 1849 aa11.62□□□□□ -0.55
LINC01888-201ENST00000415138 TAF1P21675 1872 aa11.61□□□□□ -0.55
LINC01888-201ENST00000415138 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
LINC01888-201ENST00000415138 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms